RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 DUSP8Q13202 625 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 NSDHLQ15738 373 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 INAVAQ3KP66 663 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 FLYWCH1Q4VC44 716 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 ZNF691Q5VV52 312 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 ZCCHC12Q6PEW1 402 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 SLC23A3Q6PIS1 610 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 RRM2BQ7LG56 351 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 LSRQ86X29 649 aaPredicted RBP6.57□□□□□ -1.36
SMG1-215ENST00000568239 ZNF619Q8N2I2 560 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 FAM181AQ8N9Y4 354 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 SLC7A13Q8TCU3 470 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 UBE2FQ969M7 185 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 ARSGQ96EG1 525 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 MVB12AQ96EY5 273 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 CCDC74BQ96LY2 380 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 STACQ99469 402 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 APOL4Q9BPW4 351 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 OR10A5Q9H207 317 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 FOLH1BQ9HBA9 442 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 RYDENQ9NUL5 291 aaKnown RBP6.57□□□□□ -1.36
SMG1-215ENST00000568239 FTSJ1Q9UET6 329 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 MKL2Q9ULH7 1088 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 A4GNTQ9UNA3 340 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 ZNF443Q9Y2A4 671 aaPredicted RBP6.57□□□□□ -1.36
SMG1-215ENST00000568239 IFT52Q9Y366 437 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 DYRK3O43781 588 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 PRAMEF2O60811 474 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 LINGO3P0C6S8 592 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 GKN3PP0CG01 181 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 ITGAMP11215 1152 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 S1PR1P21453 382 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 HOXD12P35452 270 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 MPLP40238 635 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 EMDP50402 254 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 SMIM11AP58511 58 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 SERTAD2Q14140 314 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 SEC23BQ15437 767 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 MAPK14Q16539 360 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 CTU2Q2VPK5 515 aaKnown RBP6.57□□□□□ -1.36
SMG1-215ENST00000568239 LIN52Q52LA3 116 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 PLEKHM3Q6ZWE6 761 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 LAPTM4BQ86VI4 370 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 TSPYL5Q86VY4 417 aaPredicted RBP6.57□□□□□ -1.36
SMG1-215ENST00000568239 TMEM151BQ8IW70 566 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 NLGN4XQ8N0W4 816 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 SETD9Q8NE22 299 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 OR4D9Q8NGE8 314 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 C16orf52Q8NHV5 167 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 GFM1Q96RP9 751 aaKnown RBP6.57□□□□□ -1.36
SMG1-215ENST00000568239 CCDC90BQ9GZT6 254 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 ZNF350Q9GZX5 532 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 Q9N2J8 555 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 KCND3Q9UK17 655 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 POFUT2Q9Y2G5 429 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 NTNG1Q9Y2I2 539 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 CLDN16Q9Y5I7 305 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 DSPPQ9NZW4 1301 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 A0A087WXM4 84 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 AGAP5A6NIR3 686 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 H3BN98 237 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 DSCR3O14972 297 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 SCRG1O75711 98 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 CYP7B1O75881 506 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 OR6B1O95007 311 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 KCNK2O95069 426 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 TIAF1O95411 115 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 SOX14O95416 240 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 AVPR2P30518 371 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 PRKAR1BP31321 381 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 FMO3P31513 532 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 HMGA2P52926 109 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 EMP3P54852 163 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 ISL1P61371 349 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 LSM11P83369 360 aaKnown RBP eCLIP6.56□□□□□ -1.36
SMG1-215ENST00000568239 DSG2Q14126 1118 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 NADK2Q4G0N4 442 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 KCTD21Q4G0X4 260 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 C6orf141Q5SZD1 244 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 MRPL2Q5T653 305 aaKnown RBP6.56□□□□□ -1.36
SMG1-215ENST00000568239 PODNL1Q6PEZ8 512 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 ZNF836Q6ZNA1 936 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 ZAR1Q86SH2 424 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 MEX3DQ86XN8 651 aaKnown RBP6.56□□□□□ -1.36
SMG1-215ENST00000568239 CHDHQ8NE62 594 aaPredicted RBP6.56□□□□□ -1.36
SMG1-215ENST00000568239 FAM81AQ8TBF8 368 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 ADAMTS16Q8TE57 1224 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 SENP5Q96HI0 755 aaPredicted RBP6.56□□□□□ -1.36
SMG1-215ENST00000568239 PRRC1Q96M27 445 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 OR1F2PQ96R84 312 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 GAL3ST4Q96RP7 486 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 MCHR1Q99705 422 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 CTRCQ99895 268 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 LANCL2Q9NS86 450 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 CTSFQ9UBX1 484 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 RARRES3Q9UL19 164 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 CHST2Q9Y4C5 530 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 R4GN57 208 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 KIF26BQ2KJY2 2108 aa6.56□□□□□ -1.36
SMG1-215ENST00000568239 SYNDIG1LA6NDD5 238 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms