RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 SCML1Q9UN30 329 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 AP1M2Q9Y6Q5 423 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 hCG_1807616A0A1W2PRN6 198 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 OR2AT4A6NND4 320 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 M0QZQ0 153 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 LANCL1O43813 399 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 GMFGO60234 142 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 ARAFP10398 606 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 MMP12P39900 470 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 OR12D2P58182 307 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 PFN3P60673 137 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 TP53I3Q53FA7 332 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 ARSIQ5FYB1 569 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 TMEM81Q6P7N7 255 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 LIMS2Q7Z4I7 341 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 TMEM185AQ8NFB2 350 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 CYB5D2Q8WUJ1 264 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 ACOT12Q8WYK0 555 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 OSTF1Q92882 214 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 DNAJA3Q96EY1 480 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 EXO5Q9H790 373 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 TCF7L1Q9HCS4 588 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 CHST2Q9Y4C5 530 aa10.27□□□□□ -0.76
PALB2-206ENST00000568219 MCM3APO60318 1980 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 TRBV23OR9-2A0A075B6M9 112 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 POP4O95707 220 aaKnown RBP10.27□□□□□ -0.77
PALB2-206ENST00000568219 HLA-DQA2P01906 255 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 EIF4EP06730 217 aaKnown RBP10.27□□□□□ -0.77
PALB2-206ENST00000568219 ZNF865P0CJ78 1059 aaPredicted RBP10.27□□□□□ -0.77
PALB2-206ENST00000568219 LIPCP11150 499 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 NFYAP23511 347 aaPredicted RBP10.27□□□□□ -0.77
PALB2-206ENST00000568219 PTH2RP49190 550 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 CTSCP53634 463 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 TMEM115Q12893 351 aaPredicted RBP10.27□□□□□ -0.77
PALB2-206ENST00000568219 HTR4Q13639 388 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 GNA13Q14344 377 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 TRAM2Q15035 370 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 TUSC1Q2TAM9 212 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 GLYR1Q49A26 553 aaPredicted RBP10.27□□□□□ -0.77
PALB2-206ENST00000568219 RTP2Q5QGT7 225 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 TMEM69Q5SWH9 247 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 PRAMEF14Q5SWL7 426 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 PRAMEF13Q5VWM6 474 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 RD3Q7Z3Z2 195 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 GPALPP1Q8IXQ4 340 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 ZFP82Q8N141 532 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 HDDC3Q8N4P3 179 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 SLC16A10Q8TF71 515 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 ZDHHC1Q8WTX9 485 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 FBLIM1Q8WUP2 373 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 SORCS1Q8WY21 1168 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 CHFRQ96EP1 664 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 MFFQ9GZY8 342 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 ABCG4Q9H172 646 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 WSB2Q9NYS7 404 aaPredicted RBP10.27□□□□□ -0.77
PALB2-206ENST00000568219 ZNF840PA6NDX5 716 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 CTSOP43234 321 aaPredicted RBP10.27□□□□□ -0.77
PALB2-206ENST00000568219 MC2RQ01718 297 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 ELAVL2Q12926 359 aaKnown RBP10.27□□□□□ -0.77
PALB2-206ENST00000568219 NLRC3Q7RTR2 1065 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 SLC44A3Q8N4M1 653 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 ESX1Q8N693 406 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 L3MBTL4Q8NA19 623 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 C2CD4CQ8TF44 421 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 ZFPM2Q8WW38 1151 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 FCAMRQ8WWV6 532 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 ORAI1Q96D31 301 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 MARVELD1Q9BSK0 173 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 NOX3Q9HBY0 568 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 FANCFQ9NPI8 374 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 BABAM2Q9NXR7 383 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 RPS6KB2Q9UBS0 482 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 ACSL5Q9ULC5 683 aa10.27□□□□□ -0.77
PALB2-206ENST00000568219 FARSAQ9Y285 508 aaKnown RBP10.27□□□□□ -0.77
PALB2-206ENST00000568219 IGLV3-10A0A075B6K4 115 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 FAM171A2A8MVW0 826 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 PI15O43692 258 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 PCDH8O95206 1070 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 CFDP00746 253 aaPredicted RBP10.26□□□□□ -0.77
PALB2-206ENST00000568219 LRG1P02750 347 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 TPOP07202 933 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 ZNF8P17098 575 aaPredicted RBP10.26□□□□□ -0.77
PALB2-206ENST00000568219 FAUP35544 74 aaKnown RBP10.26□□□□□ -0.77
PALB2-206ENST00000568219 GDNFP39905 211 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 GPR17Q13304 367 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 TECPR1Q7Z6L1 1165 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 BBS1Q8NFJ9 593 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 GNPDA2Q8TDQ7 276 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 UCN3Q969E3 161 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 ZNF354BQ96LW1 612 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 DPH1Q9BZG8 443 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 CDH10Q9Y6N8 788 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 TRBV2A0A0J9YWF9 115 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 KANTRA0A1W2PQU2 76 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 TRABD2BA6NFA1 517 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 F5H0A9 414 aaPredicted RBP10.26□□□□□ -0.77
PALB2-206ENST00000568219 GPR171O14626 319 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 GOSR2O14653 212 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 PTHLHP12272 177 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 CPEP16870 476 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms