RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 NUP54Q7Z3B4 507 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 PTRH1Q86Y79 214 aaKnown RBP16.53■□□□□ 0.24
COMMD4-222ENST00000568034 PSD4Q8NDX1 1056 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 CHDHQ8NE62 594 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-222ENST00000568034 OR5M3Q8NGP4 307 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 DIO2Q92813 273 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 PNPLA2Q96AD5 504 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 ANKRD27Q96NW4 1050 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 COL21A1Q96P44 957 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 NODALQ96S42 347 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 ADOQ96SZ5 270 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 SLC39A3Q9BRY0 314 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 TRIM8Q9BZR9 551 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 FLRT3Q9NZU0 649 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 PCDHGB6Q9Y5F9 930 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 PCDHGA10Q9Y5H3 936 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 FAM208BQ5VWN6 2430 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 EML6Q6ZMW3 1958 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 A0A0G2JMM0 328 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 A0A1W2PPB8 328 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 A0A1W2PRS3 328 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 DUXAA6NLW8 204 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 KIR3DP1A8MWS1 328 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 ABCB7O75027 752 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 SORBS2O94875 1100 aaKnown RBP16.52■□□□□ 0.24
COMMD4-222ENST00000568034 BMP2P12643 396 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 CYP4B1P13584 511 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 PTGDSP41222 190 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 MAGEA8P43361 318 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 PNLIPRP2P54317 469 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 TXNL4AP83876 142 aaKnown RBP16.52■□□□□ 0.24
COMMD4-222ENST00000568034 KLRB1Q12918 225 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 RGNQ15493 299 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 MAPK11Q15759 364 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 DECR1Q16698 335 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 MMEL1Q495T6 779 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 DCST2Q5T1A1 773 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 BICRALQ6AI39 1079 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 OLIG3Q7RTU3 272 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 GALNT10Q86SR1 603 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 FAM13CQ8NE31 585 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 SLC39A7Q92504 469 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 SECISBP2Q96T21 854 aaKnown RBP16.52■□□□□ 0.24
COMMD4-222ENST00000568034 TIMMDC1Q9NPL8 285 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 KLHL1Q9NR64 748 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 DEPPQ9NTK1 212 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 ARL8BQ9NVJ2 186 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 LUZP4Q9P127 313 aa16.52■□□□□ 0.24
COMMD4-222ENST00000568034 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-222ENST00000568034 COL6A6A6NMZ7 2263 aa16.52■□□□□ 0.23
COMMD4-222ENST00000568034 ICOSLGO75144 302 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 TNFRSF21O75509 655 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 SOX30O94993 753 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 NUDT7P0C024 238 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 CD46P15529 392 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 IL12BP29460 328 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 MTPNP58546 118 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 EFR3AQ14156 821 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 ARHGAP11BQ3KRB8 267 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 SOWAHCQ53LP3 525 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-222ENST00000568034 C8orf82Q6P1X6 216 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-222ENST00000568034 TMEM81Q6P7N7 255 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 GALNTL5Q7Z4T8 443 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 FBXW8Q8N3Y1 598 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 TEX19Q8NA77 164 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 LRRC58Q96CX6 371 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 CMTM5Q96DZ9 223 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 C5orf34Q96MH7 638 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 SDF2Q99470 211 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 ZNF350Q9GZX5 532 aa16.51■□□□□ 0.23
COMMD4-222ENST00000568034 PINLYPA6NC86 204 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 G3V3Y1 287 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 TP53I11O14683 189 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 AK1P00568 194 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 GPX2P18283 190 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 PPIBP23284 216 aaKnown RBP16.5■□□□□ 0.23
COMMD4-222ENST00000568034 KRT20P35900 424 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 CRATP43155 626 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 RFX3P48380 749 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 NFATC3Q12968 1075 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 FADDQ13158 208 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 KRT72Q14CN4 511 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 PRAMEF20Q5VT98 475 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 SLC22A10Q63ZE4 541 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 TMEM178AQ8NBL3 297 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 PCYOX1LQ8NBM8 494 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 GRHL3Q8TE85 626 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 XAGE5Q8WWM1 108 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 TMEM125Q96AQ2 219 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 GPATCH1Q9BRR8 931 aaKnown RBP16.5■□□□□ 0.23
COMMD4-222ENST00000568034 SACM1LQ9NTJ5 587 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 MRTO4Q9UKD2 239 aaKnown RBP16.5■□□□□ 0.23
COMMD4-222ENST00000568034 PCDHGB3Q9Y5G1 929 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 HRH3Q9Y5N1 445 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 CHD6Q8TD26 2715 aa16.5■□□□□ 0.23
COMMD4-222ENST00000568034 ANKRD33BA6NCL7 494 aa16.49■□□□□ 0.23
COMMD4-222ENST00000568034 AIM2O14862 343 aa16.49■□□□□ 0.23
COMMD4-222ENST00000568034 FADS1O60427 444 aa16.49■□□□□ 0.23
COMMD4-222ENST00000568034 UTS2O95399 124 aa16.49■□□□□ 0.23
COMMD4-222ENST00000568034 AGR2O95994 175 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms