RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 ACTR1AP61163 376 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 POU4F2Q12837 409 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 HSF5Q4G112 596 aaPredicted RBP11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 MPP7Q5T2T1 576 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 METAP1DQ6UB28 335 aaPredicted RBP11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 VITQ6UXI7 678 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 MOAP1Q96BY2 351 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 FCRL1Q96LA6 429 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 CLCC1Q96S66 551 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 SLC25A18Q9H1K4 315 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 S1PR1P21453 382 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 HTR3AP46098 478 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 SLC6A9P48067 706 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 TPMTP51580 245 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 SPIN3Q5JUX0 258 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 GDF6Q6KF10 455 aaPredicted RBP11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 NXPE4Q6UWF7 544 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 MFSD6LQ8IWD5 586 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 CLDN22Q8N7P3 220 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 OR56B4Q8NH76 319 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 GLYATL1Q969I3 302 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 DNAJA3Q96EY1 480 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 TBL1XR1Q9BZK7 514 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 RBM38Q9H0Z9 239 aaKnown RBP11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 TIAM2Q8IVF5 1701 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 FEZF1A0PJY2 475 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 MEIS3P1A6NDR6 274 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 ZNF860A6NHJ4 632 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 HLA-EP13747 358 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 ETV1P50549 477 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 ACTBP60709 375 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 RAP2BP61225 183 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 ACTG1P63261 375 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 TLE2Q04725 743 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 CCL14Q16627 93 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 TCTE1Q5JU00 501 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 OR4E2Q8NGC2 313 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 OR4K14Q8NGD5 310 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 SNIP1Q8TAD8 396 aaKnown RBP11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 DPH1Q9BZG8 443 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 DPEP2Q9H4A9 486 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 MYNNQ9NPC7 610 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 CLEC4EQ9ULY5 219 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 RNASET2O00584 256 aaKnown RBP11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 TNFRSF10BO14763 440 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 ERVFC1P60507 584 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 CDC20Q12834 499 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 EIF2S3LQ2VIR3 472 aaKnown RBP11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 AADACL4Q5VUY2 407 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 ZNF280BQ86YH2 543 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 AUTS2Q8WXX7 1259 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 ZMYND19Q96E35 227 aaPredicted RBP11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 MBOAT4Q96T53 435 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 DHDHQ9UQ10 334 aa11.74□□□□□ -0.53
CSPG4P13-202ENST00000567704 PTGESO14684 152 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 KHNYNO15037 678 aaKnown RBP11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 ZNF254O75437 659 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 GSRP00390 522 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 CSTBP04080 98 aaKnown RBP11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 TRAPPC2P0DI81 140 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 TRAPPC2BP0DI82 140 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 DYRK1AQ13627 763 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 MLIPQ5VWP3 458 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 GRHL2Q6ISB3 625 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 PODNL1Q6PEZ8 512 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 CRTC1Q6UUV9 634 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 ABHD13Q7L211 337 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 PAQR8Q8TEZ7 354 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 SLC41A3Q96GZ6 507 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 CARS2Q9HA77 564 aaKnown RBP11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 FANCFQ9NPI8 374 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 ACOT7O00154 380 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 NFATC1O95644 943 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 C1QBP02746 253 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 DCNP07585 359 aaKnown RBP11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 EMP3P54852 163 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 KIAA1024LP59773 190 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 POU6F2P78424 691 aaPredicted RBP11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 HYAL4Q2M3T9 481 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 PLEKHN1Q494U1 663 aaPredicted RBP11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 IRAK1BP1Q5VVH5 260 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 KIAA1211LQ6NV74 962 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 ARHGAP11AQ6P4F7 1023 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 APOOLQ6UXV4 268 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 UNC5DQ6UXZ4 953 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 DCUN1D4Q92564 292 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 SLC22A18Q96BI1 424 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 DUS3LQ96G46 650 aaKnown RBP11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 NIPSNAP1Q9BPW8 284 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 RRAGCQ9HB90 399 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 RXFP3Q9NSD7 469 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 BABAM2Q9NXR7 383 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 CLEC2DQ9UHP7 191 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 CARNS1A5YM72 827 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 C11orf98E9PRG8 122 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 HOXC11O43248 304 aaPredicted RBP11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 GJB3O75712 270 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 RAB3DO95716 219 aa11.73□□□□□ -0.53
CSPG4P13-202ENST00000567704 ASGR2P07307 311 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms