RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 WDYHV1Q96HA8 205 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 FCRL1Q96LA6 429 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 LURAP1Q96LR2 239 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 KCNK17Q96T54 332 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 UGT2B28Q9BY64 529 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 PRDM14Q9GZV8 571 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 ACBD3Q9H3P7 528 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 REEP4Q9H6H4 257 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 CALHM2Q9HA72 323 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 SLC24A3Q9HC58 644 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 SERHLQ9NQF3 203 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 NPDC1Q9NQX5 325 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-209ENST00000567635 SDHAF3Q9NRP4 125 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 DDX18Q9NVP1 670 aaKnown RBP6.3□□□□□ -1.4
SF3B3-209ENST00000567635 SH3BP4Q9P0V3 963 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 MRTO4Q9UKD2 239 aaKnown RBP6.3□□□□□ -1.4
SF3B3-209ENST00000567635 CBLCQ9ULV8 474 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 CAMK2AQ9UQM7 478 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 TMED5Q9Y3A6 229 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 ADGRG4Q8IZF6 3080 aa6.3□□□□□ -1.4
SF3B3-209ENST00000567635 ERICH4A6NGS2 130 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 CD8B2A6NJW9 211 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 TMEM114B3SHH9 223 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 TMEM233B4DJY2 109 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 SYT5O00445 386 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 PIP5K1BO14986 540 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 PDPK1O15530 556 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 FADS1O60427 444 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 ZIC3O60481 467 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 PEX11AO75192 247 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 PSMG1O95456 288 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 IL2RAP01589 272 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 BPGMP07738 259 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 PRPS2P11908 318 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 CYP4B1P13584 511 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 CREB1P16220 341 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 DDX5P17844 614 aaKnown RBP6.29□□□□□ -1.4
SF3B3-209ENST00000567635 SDC1P18827 310 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 GRK2P25098 689 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 CALRP27797 417 aaKnown RBP6.29□□□□□ -1.4
SF3B3-209ENST00000567635 MAPK1P28482 360 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 SRD5A2P31213 254 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 CEACAM8P31997 349 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-209ENST00000567635 GABRA3P34903 492 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 GPC1P35052 558 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 CLK3P49761 638 aaKnown RBP6.29□□□□□ -1.4
SF3B3-209ENST00000567635 PRKAG1P54619 331 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 GAS1P54826 345 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 TLE4Q04727 773 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 SRYQ05066 204 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 HSPB3Q12988 150 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 RCAN2Q14206 197 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 KRT71Q3SY84 523 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 FREM1Q5H8C1 2179 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 NSUN5P2Q63ZY6 315 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 OR5M10Q6IEU7 315 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 ANKRD26P1Q6NSI1 321 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 ENPP6Q6UWR7 440 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 LRIG3Q6UXM1 1119 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 ZCCHC23Q6ZST2 131 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 R3HCC1LQ7Z5L2 792 aaKnown RBP6.29□□□□□ -1.4
SF3B3-209ENST00000567635 WDR53Q7Z5U6 358 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-209ENST00000567635 LACC1Q8IV20 430 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 NUDCD3Q8IVD9 361 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 DMRTC2Q8IXT2 367 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-209ENST00000567635 NUP43Q8NFH3 380 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 TNIP2Q8NFZ5 429 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 OR6Y1Q8NGX8 325 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 CLHC1Q8NHS4 586 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 PPP1R14CQ8TAE6 165 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 ZPLD1Q8TCW7 415 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 AGR3Q8TD06 166 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 RNF138Q8WVD3 245 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 TWIST2Q8WVJ9 160 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 CIDECQ96AQ7 238 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-209ENST00000567635 EFHD2Q96C19 240 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-209ENST00000567635 MTERF3Q96E29 417 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 ZBED6CLQ96FA7 236 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-209ENST00000567635 LRRC46Q96FV0 321 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 PPP3R2Q96LZ3 170 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 TSSK3Q96PN8 268 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 TRIB1Q96RU8 372 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 TEP1Q99973 2627 aaKnown RBP6.29□□□□□ -1.4
SF3B3-209ENST00000567635 LMF2Q9BU23 707 aaKnown RBP6.29□□□□□ -1.4
SF3B3-209ENST00000567635 OR2B2Q9GZK3 357 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 C3orf14Q9HBI5 128 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 MCCC2Q9HCC0 563 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 Q9N2J8 555 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 ACSS1Q9NUB1 689 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-209ENST00000567635 TAS2R10Q9NYW0 307 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 NTMQ9P121 344 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 ZNF629Q9UEG4 869 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-209ENST00000567635 FBXL2Q9UKC9 423 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 WIF1Q9Y5W5 379 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 F8P00451 2351 aa6.29□□□□□ -1.4
SF3B3-209ENST00000567635 PRR14LQ5THK1 2151 aa6.28□□□□□ -1.4
SF3B3-209ENST00000567635 GXYLT2A0PJZ3 443 aa6.28□□□□□ -1.4
SF3B3-209ENST00000567635 KDM4EB2RXH2 506 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-209ENST00000567635 DVL2O14641 736 aa6.28□□□□□ -1.4
SF3B3-209ENST00000567635 BIRC5O15392 142 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms