RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ADAM5Q6NVV9 412 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 GTF2H2CQ6P1K8 395 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 ZNF704Q6ZNC4 412 aaPredicted RBP11.48□□□□□ -0.57
RNF40-208ENST00000565995 DNM1P46Q6ZS02 220 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 CHMP1BQ7LBR1 199 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 PAGE2Q7Z2X7 111 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 CCDC91Q7Z6B0 441 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 TBC1D1Q86TI0 1168 aaPredicted RBP11.48□□□□□ -0.57
RNF40-208ENST00000565995 MYLK4Q86YV6 388 aaPredicted RBP11.48□□□□□ -0.57
RNF40-208ENST00000565995 METTL4Q8N3J2 472 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 FADS6Q8N9I5 356 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 ZNF675Q8TD23 568 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 FIG4Q92562 907 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 TMBIM1Q969X1 311 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 NXNL1Q96CM4 212 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 ERP27Q96DN0 273 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 ZNF681Q96N22 645 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 NTMT1Q9BV86 223 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 FUT8Q9BYC5 575 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 BRINP2Q9C0B6 783 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 OR10A4Q9H209 315 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 CENPHQ9H3R5 247 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 ANGPTL3Q9Y5C1 460 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 ALPK2Q86TB3 2170 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 MALRD1Q5VYJ5 2156 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 BCAS2O75934 225 aaPredicted RBP11.47□□□□□ -0.57
RNF40-208ENST00000565995 CLDN9O95484 217 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 GRK2P25098 689 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 PIK3CGP48736 1102 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 NR1H2P55055 460 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 DUSP2Q05923 314 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 CCNYL2Q5T2Q4 361 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 FAM214BQ7L5A3 538 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 GOLGA7Q7Z5G4 137 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 CENPLQ8N0S6 344 aaPredicted RBP11.47□□□□□ -0.57
RNF40-208ENST00000565995 GOLGA6L1Q8N7Z2 621 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 OR52R1Q8NGF1 315 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 TMEM158Q8WZ71 300 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 TM4SF18Q96CE8 201 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 CNRIP1Q96F85 164 aaPredicted RBP11.47□□□□□ -0.57
RNF40-208ENST00000565995 ZC3HAV1LQ96H79 300 aaKnown RBP11.47□□□□□ -0.57
RNF40-208ENST00000565995 PPCSQ9HAB8 311 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 EHD3Q9NZN3 535 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 PSMC3IPQ9P2W1 217 aaPredicted RBP11.47□□□□□ -0.57
RNF40-208ENST00000565995 TBK1Q9UHD2 729 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 DKKL1Q9UK85 242 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 PSME2Q9UL46 239 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 ZNF337Q9Y3M9 751 aa11.47□□□□□ -0.57
RNF40-208ENST00000565995 TNPO3Q9Y5L0 923 aaKnown RBP11.47□□□□□ -0.57
RNF40-208ENST00000565995 OR7A17O14581 309 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 CD5LO43866 347 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 REM1O75628 298 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 F12P00748 615 aaPredicted RBP11.46□□□□□ -0.57
RNF40-208ENST00000565995 PLAUP00749 431 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 FEN1P39748 380 aaKnown RBP11.46□□□□□ -0.57
RNF40-208ENST00000565995 KCNJ5P48544 419 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 ZNF844Q08AG5 666 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 GANABQ14697 944 aaKnown RBP11.46□□□□□ -0.57
RNF40-208ENST00000565995 ACAP2Q15057 778 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 PFKFB4Q16877 469 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 CLEC12BQ2HXU8 276 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 GLYR1Q49A26 553 aaPredicted RBP11.46□□□□□ -0.57
RNF40-208ENST00000565995 ZNF628Q5EBL2 1059 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 FRG2Q64ET8 278 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 LRIG3Q6UXM1 1119 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 DNAJC14Q6Y2X3 702 aaPredicted RBP11.46□□□□□ -0.57
RNF40-208ENST00000565995 STAC2Q6ZMT1 411 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 RAPH1Q70E73 1250 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 CMC1Q7Z7K0 106 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 CROCCP2Q86T23 111 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 METTL25Q8N6Q8 603 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 ADCY4Q8NFM4 1077 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 OR2M3Q8NG83 312 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 VSTM2LQ96N03 204 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 FRG2BQ96QU4 278 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 ADOQ96SZ5 270 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 MRPL1Q9BYD6 325 aaKnown RBP11.46□□□□□ -0.57
RNF40-208ENST00000565995 REG4Q9BYZ8 158 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 VIPAS39Q9H9C1 493 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 PROCRQ9UNN8 238 aa11.46□□□□□ -0.57
RNF40-208ENST00000565995 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.46□□□□□ -0.586e-7■■■□□ 15.4
RNF40-208ENST00000565995 A0A087X1B8 175 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 RNF223E7ERA6 249 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 FADS1O60427 444 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 MYZAPP0CAP1 466 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 NID1P14543 1247 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 IDUAP35475 653 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 SERPINB9P50453 376 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 MAPK12P53778 367 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 TRA2BP62995 288 aaKnown RBP11.45□□□□□ -0.58
RNF40-208ENST00000565995 SIRPAP78324 504 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 GALNT1Q10472 559 aaPredicted RBP11.45□□□□□ -0.58
RNF40-208ENST00000565995 FAM83EQ2M2I3 478 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 GGTA1PQ4G0N0 100 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 LGSNQ5TDP6 509 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 ANKRD34AQ69YU3 496 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 OR5M10Q6IEU7 315 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 OR6K3Q8NGY3 331 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 FNDC9Q8TBE3 224 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 GPR78Q96P69 363 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms