RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 DNAJC27Q9NZQ0 273 aa8.62□□□□□ -1.03
AC138869.3-201ENST00000563960 NDUFAF4Q9P032 175 aa8.62□□□□□ -1.03
AC138869.3-201ENST00000563960 PIPOXQ9P0Z9 390 aa8.62□□□□□ -1.03
AC138869.3-201ENST00000563960 FTSJ1Q9UET6 329 aa8.62□□□□□ -1.03
AC138869.3-201ENST00000563960 ATXN7L1Q9ULK2 861 aaPredicted RBP8.62□□□□□ -1.03
AC138869.3-201ENST00000563960 LHX6Q9UPM6 363 aa8.62□□□□□ -1.03
AC138869.3-201ENST00000563960 COL4A4P53420 1690 aaPredicted RBP8.62□□□□□ -1.03
AC138869.3-201ENST00000563960 TMEM229AB2RXF0 380 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 ZNF593O00488 134 aaPredicted RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 KPNA3O00505 521 aaPredicted RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 MAFKO60675 156 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 GATBO75879 557 aaKnown RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 LY86O95711 162 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 SOD1P00441 154 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 IGLV3-25P01717 112 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 CBSLP0DN79 551 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 MUC1P15941 1255 aaPredicted RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 GKP32189 559 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 CBSP35520 551 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 NR0B1P51843 470 aaKnown RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 EIF4EBP2Q13542 120 aaPredicted RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 ALKBH1Q13686 389 aaKnown RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 GK2Q14410 553 aaPredicted RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 MELKQ14680 651 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 SEC23BQ15437 767 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 TEAD2Q15562 447 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 EIF2S3LQ2VIR3 472 aaKnown RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 ATAT1Q5SQI0 421 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 ARTNQ5T4W7 220 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 OR7E24Q6IFN5 339 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 Q6ZTK2 550 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 WDR53Q7Z5U6 358 aaPredicted RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 BCDIN3DQ7Z5W3 292 aaKnown RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 SERPINA12Q8IW75 414 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 GPR26Q8NDV2 337 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 DNAJB8Q8NHS0 232 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 RXFP4Q8TDU9 374 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 WDR89Q96FK6 387 aaPredicted RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 PFDN5Q99471 154 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 SLC46A2Q9BY10 475 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 LMAN2LQ9H0V9 348 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 NSUN3Q9H649 340 aaKnown RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 POPDC3Q9HBV1 291 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 DHCR7Q9UBM7 475 aaKnown RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 TRPS1Q9UHF7 1281 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 FAM50BQ9Y247 325 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 MTCH2Q9Y6C9 303 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 A0A1B0GVC2 190 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 C5orf52A6NGY3 159 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 A6NIN4 97 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 C2orf74A8MZ97 194 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 DISC1C4P0D8 188 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 UBE2CO00762 179 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 MATN3O15232 486 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 IRAK2O43187 625 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 SLC19A2O60779 497 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 HLA-DQB2P05538 268 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 CKMP06732 381 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 TNFRSF1BP20333 461 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 ACTR1BP42025 376 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 CDH12P55289 794 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 TBX4P57082 545 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 SIM1P81133 766 aaPredicted RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 HMGCS1Q01581 520 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 GUCA2BQ16661 112 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 SYTL3Q4VX76 610 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 ZRANB3Q5FWF4 1079 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 GCNT6Q5T4J0 391 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 ZNF660Q6AZW8 331 aaPredicted RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 DHRS7BQ6IAN0 325 aaPredicted RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 MZT2AQ6P582 158 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 B3GLCTQ6Y288 498 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 LAPTM4BQ86VI4 370 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 CIR1Q86X95 450 aaPredicted RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 FAM46DQ8NEK8 389 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 ASZ1Q8WWH4 475 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 NR4A3Q92570 626 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 UBL7Q96S82 380 aaPredicted RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 TSNAXQ99598 290 aaKnown RBP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 RNF32Q9H0A6 362 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 C11orf16Q9NQ32 467 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 RBM22Q9NW64 420 aaKnown RBP eCLIP8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 NTMQ9P121 344 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 GSTK1Q9Y2Q3 226 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 KCTD3Q9Y597 815 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 PLXNA3P51805 1871 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 MYO16Q9Y6X6 1858 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 PATJQ8NI35 1801 aa8.61□□□□□ -1.03
AC138869.3-201ENST00000563960 TMEM200CA6NKL6 621 aa8.6□□□□□ -1.03
AC138869.3-201ENST00000563960 GALR3O60755 368 aaPredicted RBP8.6□□□□□ -1.03
AC138869.3-201ENST00000563960 MOSPD3O75425 235 aa8.6□□□□□ -1.03
AC138869.3-201ENST00000563960 NUDT7P0C024 238 aa8.6□□□□□ -1.03
AC138869.3-201ENST00000563960 PEPDP12955 493 aa8.6□□□□□ -1.03
AC138869.3-201ENST00000563960 FGF9P31371 208 aaPredicted RBP8.6□□□□□ -1.03
AC138869.3-201ENST00000563960 SPAM1P38567 509 aa8.6□□□□□ -1.03
AC138869.3-201ENST00000563960 EIF2S3P41091 472 aaKnown RBP8.6□□□□□ -1.03
AC138869.3-201ENST00000563960 ETV5P41161 510 aa8.6□□□□□ -1.03
AC138869.3-201ENST00000563960 RGS4P49798 205 aa8.6□□□□□ -1.03
AC138869.3-201ENST00000563960 RAG2P55895 527 aa8.6□□□□□ -1.03
AC138869.3-201ENST00000563960 DCDP81605 110 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms