RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 WBP11Q9Y2W2 641 aaKnown RBP16.05■□□□□ 0.16
NME3-205ENST00000563854 ANKRD17O75179 2603 aaKnown RBP16.05■□□□□ 0.16
NME3-205ENST00000563854 CLCA1A8K7I4 914 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 SYT5O00445 386 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 PLOD2O00469 737 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 GMFGO60234 142 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 CPN1P15169 458 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 SDC1P18827 310 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 PRKAG1P54619 331 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 GFRA1P56159 465 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 GAB1Q13480 694 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 KIAA0040Q15053 153 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 CYP27C1Q4G0S4 372 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 ZNF385BQ569K4 471 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 RAET1LQ5VY80 246 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 KANK2Q63ZY3 851 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 ZCCHC23Q6ZST2 131 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 TRABD2AQ86V40 505 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 UBQLNLQ8IYU4 475 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 GCNT2Q8N0V5 402 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 RIBC1Q8N443 379 aaPredicted RBP16.04■□□□□ 0.16
NME3-205ENST00000563854 FBXO30Q8TB52 745 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 CCT7Q99832 543 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 TRMOQ9BU70 441 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 POLDIP3Q9BY77 421 aaKnown RBP16.04■□□□□ 0.16
NME3-205ENST00000563854 DSN1Q9H410 356 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 SH3BP4Q9P0V3 963 aa16.04■□□□□ 0.16
NME3-205ENST00000563854 MED12Q93074 2177 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 CCDC168Q8NDH2 2452 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 B4DXG7 233 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 EFNA1P20827 205 aaPredicted RBP16.03■□□□□ 0.16
NME3-205ENST00000563854 PRPH2P23942 346 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 GABRA3P34903 492 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 OPRM1P35372 400 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 LHX2P50458 406 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 GAS1P54826 345 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 FOXF2Q12947 444 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 FLYWCH1Q4VC44 716 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 FBXW10Q5XX13 1052 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 POMZP3Q6PJE2 187 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 Q6ZSR9 355 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 GRAMD2AQ8IUY3 354 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 BANPQ8N9N5 519 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 ZFP28Q8NHY6 868 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 TWIST2Q8WVJ9 160 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 INTS12Q96CB8 462 aaKnown RBP16.03■□□□□ 0.16
NME3-205ENST00000563854 RMND5BQ96G75 393 aaPredicted RBP16.03■□□□□ 0.16
NME3-205ENST00000563854 METTL2AQ96IZ6 378 aaKnown RBP16.03■□□□□ 0.16
NME3-205ENST00000563854 REEP4Q9H6H4 257 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 MKS1Q9NXB0 559 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 MED11Q9P086 117 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 BAIAP2L1Q9UHR4 511 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 MRTO4Q9UKD2 239 aaKnown RBP16.03■□□□□ 0.16
NME3-205ENST00000563854 DNAJC15Q9Y5T4 150 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 AKAP9Q99996 3911 aa16.03■□□□□ 0.16
NME3-205ENST00000563854 GXYLT2A0PJZ3 443 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 PIP5K1BO14986 540 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 LSM1O15116 133 aaKnown RBP16.02■□□□□ 0.16
NME3-205ENST00000563854 PSMG1O95456 288 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 NUDT17P0C025 328 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 HK1P19367 917 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 PEX19P40855 299 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 CPA2P48052 419 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 CLK3P49761 638 aaKnown RBP16.02■□□□□ 0.16
NME3-205ENST00000563854 DSCR4P56555 118 aaPredicted RBP16.02■□□□□ 0.16
NME3-205ENST00000563854 RFTN2Q52LD8 501 aaPredicted RBP16.02■□□□□ 0.16
NME3-205ENST00000563854 ARL13AQ5H913 290 aaPredicted RBP16.02■□□□□ 0.16
NME3-205ENST00000563854 P4HA3Q7Z4N8 544 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 GALNT10Q86SR1 603 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 LUZP2Q86TE4 346 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 MARCH3Q86UD3 253 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 OR2M3Q8NG83 312 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 OR5M1Q8NGP8 315 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 GPR151Q8TDV0 419 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 RNF138Q8WVD3 245 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 PIK3R3Q92569 461 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 SLC9A6Q92581 669 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 TM9SF2Q99805 663 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 LMF2Q9BU23 707 aaKnown RBP16.02■□□□□ 0.16
NME3-205ENST00000563854 TBL1XR1Q9BZK7 514 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 C3orf14Q9HBI5 128 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 SDHAF3Q9NRP4 125 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 GIMAP2Q9UG22 337 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 ABCG2Q9UNQ0 655 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 TRAF6Q9Y4K3 522 aa16.02■□□□□ 0.16
NME3-205ENST00000563854 SEC14L5O43304 696 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 FADS1O60427 444 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 ZIC3O60481 467 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 NPHS1O60500 1241 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 CTAG2O75638 210 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 KCNH1O95259 989 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 UTS2O95399 124 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 IL33O95760 270 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 PRPS2P11908 318 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 ZNF708P17019 499 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 PSMD4P55036 377 aaKnown RBP16.01■□□□□ 0.15
NME3-205ENST00000563854 MANFP55145 182 aaKnown RBP16.01■□□□□ 0.15
NME3-205ENST00000563854 CLDN18P56856 261 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 FBXL19-AS1Q494R0 122 aa16.01■□□□□ 0.15
NME3-205ENST00000563854 CHMP1BQ7LBR1 199 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms