RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 HRNRQ86YZ3 2850 aaPredicted RBP15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 MED12Q93074 2177 aa15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 TTC36A6NLP5 189 aa15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 EEF1E1-BLOC1S5C9J1V9 151 aa15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 EEF1E1O43324 174 aaKnown RBP15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 SHBGP04278 402 aa15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 CRHP06850 196 aa15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 CPA3P15088 417 aa15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 EVI2BP34910 448 aa15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 AGFG1P52594 562 aaKnown RBP15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 HOMEZQ8IX15 550 aa15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 OR2M3Q8NG83 312 aa15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 GOT1L1Q8NHS2 421 aaPredicted RBP15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 HOXB13Q92826 284 aaPredicted RBP15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 FCRL1Q96LA6 429 aa15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 TMUB1Q9BVT8 246 aa15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 SDHAF3Q9NRP4 125 aa15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 CCM2LQ9NUG4 571 aaPredicted RBP15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 FAM120CQ9NX05 1096 aaKnown RBP15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 DKKL1Q9UK85 242 aa15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 POLR3HQ9Y535 204 aaPredicted RBP15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 MTORP42345 2549 aa15.59■□□□□ 0.09
VPS9D1-203ENST00000563798 LINC01387J3KSC0 135 aa15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 TBX19O60806 448 aa15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 IL33O95760 270 aa15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 NTSP30990 170 aa15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 SRYQ05066 204 aa15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 SLC18A2Q05940 514 aa15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 ZNF155Q12901 538 aaPredicted RBP15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 GANABQ14697 944 aaKnown RBP15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 DECR1Q16698 335 aa15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 CFAP157Q5JU67 520 aa15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 OR5M10Q6IEU7 315 aa15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 TMEM107Q6UX40 140 aa15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 CAMKMTQ7Z624 323 aa15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 CHDHQ8NE62 594 aaPredicted RBP15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 OR4K17Q8NGC6 315 aa15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 DACH2Q96NX9 599 aa15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 TRMOQ9BU70 441 aa15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 RBM24Q9BX46 236 aaKnown RBP15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 Q9N2J8 555 aa15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 DDX18Q9NVP1 670 aaKnown RBP15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 PPP4R1LQ9P1A2 415 aa15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 MRTO4Q9UKD2 239 aaKnown RBP15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 SETD2Q9BYW2 2564 aaPredicted RBP15.58■□□□□ 0.08
VPS9D1-203ENST00000563798 IGLV3-32A0A0A0MS00 114 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 A8MXE2 369 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 SLC28A1O00337 649 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 CRCPO75575 148 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 TNFSF13O75888 250 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 PEPDP12955 493 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 MAP3K8P41279 467 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 PSMD4P55036 377 aaKnown RBP15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 OCRLQ01968 901 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 ZNHIT3Q15649 155 aaPredicted RBP15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 GLYR1Q49A26 553 aaPredicted RBP15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 LIPMQ5VYY2 423 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 Q6ZSR9 355 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 GSPT2Q8IYD1 628 aaKnown RBP15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 LINC01560Q8TB33 94 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 INTS12Q96CB8 462 aaKnown RBP15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 EGLN2Q96KS0 407 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 ALPK1Q96QP1 1244 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 DSN1Q9H410 356 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 C1orf109Q9NX04 203 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 GALNT8Q9NY28 637 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 NTMQ9P121 344 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 PACSIN3Q9UKS6 424 aa15.57■□□□□ 0.08
VPS9D1-203ENST00000563798 NF1P21359 2839 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 C17orf51A8MQB3 221 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 COPEO14579 308 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 SEC22BO75396 215 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 TGM6O95932 706 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 DNASE1P24855 282 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 FRKP42685 505 aaPredicted RBP15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 CLDN15P56746 228 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 OR2A2Q6IF42 318 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 PAMR1Q6UXH9 720 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 TGIF2LYQ8IUE0 185 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 GRAMD2AQ8IUY3 354 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 LRRN4CLQ8ND94 238 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 CDC26Q8NHZ8 85 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 CCT7Q99832 543 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 RTN4RQ9BZR6 473 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 PLEKHF2Q9H8W4 249 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 C3orf14Q9HBI5 128 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 FLRT3Q9NZU0 649 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 MID2Q9UJV3 735 aa15.56■□□□□ 0.08
VPS9D1-203ENST00000563798 AKAP6Q13023 2319 aa15.55■□□□□ 0.08
VPS9D1-203ENST00000563798 PRRC2AP48634 2157 aaKnown RBP15.55■□□□□ 0.08
VPS9D1-203ENST00000563798 A0A1W2PNV4 684 aa15.55■□□□□ 0.08
VPS9D1-203ENST00000563798 MSTNO14793 375 aa15.55■□□□□ 0.08
VPS9D1-203ENST00000563798 AZIN1O14977 448 aa15.55■□□□□ 0.08
VPS9D1-203ENST00000563798 RGS14O43566 566 aa15.55■□□□□ 0.08
VPS9D1-203ENST00000563798 SCO2O43819 266 aa15.55■□□□□ 0.08
VPS9D1-203ENST00000563798 TNFRSF21O75509 655 aa15.55■□□□□ 0.08
VPS9D1-203ENST00000563798 FGF4P08620 206 aa15.55■□□□□ 0.08
VPS9D1-203ENST00000563798 KRT4P19013 534 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms