RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 BAP18Q8IXM2 172 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 CMIPQ8IY22 773 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 RGL4Q8IZJ4 473 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 LRRC52Q8N7C0 313 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 PNLDC1Q8NA58 520 aaKnown RBP4.66□□□□□ -1.66
TCF4-215ENST00000562638 KIAA0895Q8NCT3 520 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 SPPL2AQ8TCT8 520 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 MITD1Q8WV92 249 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 PIH1D2Q8WWB5 315 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 GHSRQ92847 366 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 CDS1Q92903 461 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 MRGPRFQ96AM1 343 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 EAF2Q96CJ1 260 aaPredicted RBP4.66□□□□□ -1.66
TCF4-215ENST00000562638 ARSGQ96EG1 525 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 TSPAN17Q96FV3 270 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 RCC1LQ96I51 464 aaKnown RBP4.66□□□□□ -1.66
TCF4-215ENST00000562638 MSLNLQ96KJ4 702 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 SAMD8Q96LT4 415 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 PTCHD1Q96NR3 888 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 FOXN4Q96NZ1 517 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 ZNF382Q96SR6 550 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 TSNAXQ99598 290 aaKnown RBP4.66□□□□□ -1.66
TCF4-215ENST00000562638 RBBP8Q99708 897 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 WRAP53Q9BUR4 548 aaKnown RBP4.66□□□□□ -1.66
TCF4-215ENST00000562638 RUSC1Q9BVN2 902 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 APOL6Q9BWW8 343 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 SLC12A9Q9BXP2 914 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 ITPAQ9BY32 194 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 MAGEB5Q9BZ81 275 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 WDR11Q9BZH6 1224 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 COMMD4Q9H0A8 199 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 LPAR2Q9HBW0 351 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 ZBTB26Q9HCK0 441 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 ABCB9Q9NP78 766 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 MYNNQ9NPC7 610 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 KRCC1Q9NPI7 259 aaPredicted RBP4.66□□□□□ -1.66
TCF4-215ENST00000562638 MKKSQ9NPJ1 570 aaPredicted RBP4.66□□□□□ -1.66
TCF4-215ENST00000562638 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.66□□□□□ -1.661e-6■■□□□ 14.2
TCF4-215ENST00000562638 EXOSC3Q9NQT5 275 aaKnown RBP4.66□□□□□ -1.66
TCF4-215ENST00000562638 GPR173Q9NS66 373 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 PGPEP1Q9NXJ5 209 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 BTG4Q9NY30 223 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 SCN3BQ9NY72 215 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 CALML5Q9NZT1 146 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 MARCOQ9UEW3 520 aaPredicted RBP4.66□□□□□ -1.66
TCF4-215ENST00000562638 SLC25A13Q9UJS0 675 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 PSG11Q9UQ72 335 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 NOD1Q9Y239 953 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 TIAM2Q8IVF5 1701 aa4.66□□□□□ -1.66
TCF4-215ENST00000562638 COL1A2P08123 1366 aa4.65□□□□□ -1.66
TCF4-215ENST00000562638 TBC1D3DA0A087WVF3 549 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 TBC1D3IA0A087WXS9 549 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 TBC1D3EA0A087X179 549 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 A0A0U1RQK1 487 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 LOC100996750A0A140TA64 210 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 ZNF320A2RRD8 509 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 CBY3A6NI87 242 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 TMEM200CA6NKL6 621 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 SLC22A31A6NKX4 558 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 TBC1D3LB9A6J9 549 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 INMT-MINDY4F8WBC2 141 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 INPP4BO15327 924 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 TPST1O60507 370 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 FAM20BO75063 409 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 FZD7O75084 574 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 SLCO2B1O94956 709 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 SLC25A27O95847 323 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 CYB5R3P00387 301 aaPredicted RBP4.65□□□□□ -1.67
TCF4-215ENST00000562638 SERPINA3P01011 423 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 LDLRP01130 860 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 CALCAP01258 141 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 MT-ND2P03891 347 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 APODP05090 189 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 SFTPBP07988 381 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 ERCC1P07992 297 aaPredicted RBP4.65□□□□□ -1.67
TCF4-215ENST00000562638 ALDOCP09972 364 aaKnown RBP4.65□□□□□ -1.67
TCF4-215ENST00000562638 HKR1P10072 659 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 SCGB1A1P11684 91 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 ZNF7P17097 686 aaPredicted RBP4.65□□□□□ -1.67
TCF4-215ENST00000562638 ADCYAP1P18509 176 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 EPHA1P21709 976 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 LPOP22079 712 aaPredicted RBP4.65□□□□□ -1.67
TCF4-215ENST00000562638 CCNOP22674 350 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 GADD45AP24522 165 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 APEX1P27695 318 aaKnown RBP4.65□□□□□ -1.67
TCF4-215ENST00000562638 GGT2P36268 569 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 KCNQ1P51787 676 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 UBE2G2P60604 165 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 MAXP61244 160 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 DYNLL1P63167 89 aaKnown RBP4.65□□□□□ -1.67
TCF4-215ENST00000562638 CDK6Q00534 326 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 PSG6Q00889 435 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 IRF8Q02556 426 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 PIGFQ07326 219 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 CRYZQ08257 329 aaKnown RBP4.65□□□□□ -1.67
TCF4-215ENST00000562638 CDK5R2Q13319 367 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 SLC10A1Q14973 349 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 RAB35Q15286 201 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 RSU1Q15404 277 aa4.65□□□□□ -1.67
TCF4-215ENST00000562638 SF3A2Q15428 464 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms