RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 DCAF7P61962 342 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 FNDC7Q5VTL7 733 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 REP15Q6BDI9 236 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 SLC25A25Q6KCM7 469 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 APOOLQ6UXV4 268 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 RTL4Q6ZR62 310 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.98□□□□□ -0.97
CLK3-208ENST00000562626 HMGN2P46Q86SG4 172 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 TAGAPQ8N103 731 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 CISD2Q8N5K1 135 aaKnown RBP8.98□□□□□ -0.97
CLK3-208ENST00000562626 TEX19Q8NA77 164 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 VPS37AQ8NEZ2 397 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 SPPL2AQ8TCT8 520 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 MIPOL1Q8TD10 442 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 GRHL3Q8TE85 626 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 PAQR8Q8TEZ7 354 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 TM9SF4Q92544 642 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 ITCHQ96J02 903 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 KLHDC3Q9BQ90 382 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 PIGUQ9H490 435 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 IL1RL2Q9HB29 575 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 GALNT9Q9HCQ5 603 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 TMEM45AQ9NWC5 275 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 TUBA8Q9NY65 449 aaPredicted RBP8.98□□□□□ -0.97
CLK3-208ENST00000562626 ABI3Q9P2A4 366 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 GMPR2Q9P2T1 348 aaKnown RBP8.98□□□□□ -0.97
CLK3-208ENST00000562626 KCNE5Q9UJ90 142 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 PCDHGB4Q9UN71 923 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 OR10H1Q9Y4A9 318 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 CAPN7Q9Y6W3 813 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 MYO18BQ8IUG5 2567 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 ESPL1Q14674 2120 aa8.98□□□□□ -0.97
CLK3-208ENST00000562626 ZNF462Q96JM2 2506 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 OR6C70A6NIJ9 312 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 LRRC3CA6NJW4 275 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 CAPN14A8MX76 684 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 PYCARD-AS1I3L0S3 204 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 SUV39H1O43463 412 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 FAM107AO95990 144 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 ALOX5P09917 674 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 RFPL3SP0C7P2 107 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 COX4I1P13073 169 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 ETFAP13804 333 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 CD46P15529 392 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 MST1P26927 711 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 CHI3L1P36222 383 aaPredicted RBP8.97□□□□□ -0.97
CLK3-208ENST00000562626 CASRP41180 1078 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 CASP3P42574 277 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 TRPC1P48995 793 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 PRIM2P49643 509 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 MEOX1P50221 254 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 PNLIPRP2P54317 469 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 IRX1P78414 480 aaPredicted RBP8.97□□□□□ -0.97
CLK3-208ENST00000562626 FOXO1Q12778 655 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 CAPRIN1Q14444 709 aaKnown RBP8.97□□□□□ -0.97
CLK3-208ENST00000562626 GRAMD1BQ3KR37 738 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 ZCCHC12Q6PEW1 402 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 ANGPTL8Q6UXH0 198 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 DHDDSQ86SQ9 333 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 HPS6Q86YV9 775 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 GPALPP1Q8IXQ4 340 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 FBXW8Q8N3Y1 598 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 DPP10Q8N608 796 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 COX18Q8N8Q8 333 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 ANKFN1Q8N957 763 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 GOLM1Q8NBJ4 401 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 OR2M7Q8NG81 312 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 FBXO27Q8NI29 283 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 DIO2Q92813 273 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 MOAP1Q96BY2 351 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 RCN3Q96D15 328 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 SNRNP40Q96DI7 357 aaKnown RBP8.97□□□□□ -0.97
CLK3-208ENST00000562626 C5orf34Q96MH7 638 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 FRMD6Q96NE9 622 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 COL21A1Q96P44 957 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 STACQ99469 402 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 CPPED1Q9BRF8 314 aaPredicted RBP8.97□□□□□ -0.97
CLK3-208ENST00000562626 BTBD2Q9BX70 525 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 RSPO3Q9BXY4 272 aaPredicted RBP8.97□□□□□ -0.97
CLK3-208ENST00000562626 TSPAN10Q9H1Z9 355 aaPredicted RBP8.97□□□□□ -0.97
CLK3-208ENST00000562626 RUBCNLQ9H714 662 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 RMND5AQ9H871 391 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 TPT1P8Q9HAU6 139 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 Q9N2J8 555 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 DUSP22Q9NRW4 184 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 ASF1BQ9NVP2 202 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 LEF1Q9UJU2 399 aaPredicted RBP8.97□□□□□ -0.97
CLK3-208ENST00000562626 FAF1Q9UNN5 650 aaPredicted RBP8.97□□□□□ -0.97
CLK3-208ENST00000562626 USP22Q9UPT9 525 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 ARL2BPQ9Y2Y0 163 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 NDUFAF1Q9Y375 327 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 HIVEP3Q5T1R4 2406 aa8.97□□□□□ -0.97
CLK3-208ENST00000562626 MED12LQ86YW9 2145 aa8.96□□□□□ -0.97
CLK3-208ENST00000562626 DOCK7Q96N67 2140 aa8.96□□□□□ -0.97
CLK3-208ENST00000562626 NPIPB9F8W1W9 429 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 CLIC1O00299 241 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 MRASO14807 208 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 ANGPT2O15123 496 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 OIP5O43482 229 aa8.96□□□□□ -0.98
CLK3-208ENST00000562626 PEX1O43933 1283 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms