RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 CCR2P41597 374 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 TM4SF4P48230 202 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 BTG1P62324 171 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 FUT5Q11128 374 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 ST3GAL3Q11203 375 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 FAM46CQ5VWP2 391 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 SDE2Q6IQ49 451 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 ZNF322Q6U7Q0 402 aaPredicted RBP13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 VRK2Q86Y07 508 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 SAMD12Q8N8I0 201 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 OR52N1Q8NH53 320 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 ZNF514Q96K75 400 aaPredicted RBP13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 TBX5Q99593 518 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 KCNN2Q9H2S1 579 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 PIGUQ9H490 435 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 ISG20L2Q9H9L3 353 aaKnown RBP13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 EQTNQ9NQ60 294 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 SRRDQ9UH36 339 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 KCNE3Q9Y6H6 103 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 GOLGA4Q13439 2230 aaKnown RBP13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 MTCL1Q9Y4B5 1905 aaKnown RBP13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 A0A0G2JPF8 293 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 C17orf113A0A1B0GUU1 675 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 FAM183AA6NL82 134 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 HNRNPCL2B2RXH8 293 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 HNRNPCL3B7ZW38 293 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 SOCS6O14544 535 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 KIAA0355O15063 1070 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 EEF1E1O43324 174 aaKnown RBP13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 CHP2O43745 196 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 HNRNPCL4P0DMR1 293 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 NUDT1P36639 197 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 TAS2R38P59533 333 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 SP3Q02447 781 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 TMEM44Q2T9K0 475 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 EOGTQ5NDL2 527 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 OR4C11Q6IEV9 310 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 OR8H3Q8N146 312 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 C16orf58Q96GQ5 468 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 DHRS9Q9BPW9 319 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 OR52A5Q9H2C5 316 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 C11orf49Q9H6J7 331 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 GPR55Q9Y2T6 319 aaPredicted RBP13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 RNF13O43567 381 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 C8orf89P0DMQ9 161 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 STOMP27105 288 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 OMPP47874 163 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 MLC1Q15049 377 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 ZNF750Q32MQ0 723 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 ZBTB37Q5TC79 503 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 VASNQ6EMK4 673 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 BHLHB9Q6PI77 547 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 GET4Q7L5D6 327 aaPredicted RBP13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 UBE3DQ7Z6J8 389 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 NR2C2APQ86WQ0 139 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 LRRC28Q86X40 367 aaPredicted RBP13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 CCDC116Q8IYX3 515 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 SLC38A6Q8IZM9 456 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 OR5M3Q8NGP4 307 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 TCEAL4Q96EI5 215 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 NUDT15Q9NV35 164 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 WNT6Q9Y6F9 365 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 KIF26AQ9ULI4 1882 aaPredicted RBP13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 EIF4EP06730 217 aaKnown RBP13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 PAICSP22234 425 aaKnown RBP13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 HTR1FP30939 366 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 ACSM1Q08AH1 577 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 NTRK2Q16620 822 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 CPOQ8IVL8 374 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 NKAIN4Q8IVV8 208 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 GHDCQ8N2G8 530 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 DACT3Q96B18 629 aaPredicted RBP13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 ZG16BQ96DA0 208 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 OMA1Q96E52 524 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 LRIG1Q96JA1 1093 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 FAIM2Q9BWQ8 316 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 HMX1Q9NP08 348 aaPredicted RBP13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 CYSLTR2Q9NS75 346 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 LIPT1Q9Y234 373 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 EXOGQ9Y2C4 368 aaKnown RBP13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 NTNG1Q9Y2I2 539 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 SPEF1Q9Y4P9 236 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 PCYT1BQ9Y5K3 369 aaPredicted RBP13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 CACNG2Q9Y698 323 aa13.09□□□□□ -0.31
VPS9D1-202ENST00000561976 PRR23AA6NEV1 266 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 LCMT2O60294 686 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 PAPLNO95428 1278 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 GAAP10253 952 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 C6P13671 934 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 SHC1P29353 583 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 ACSL1P33121 698 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 MTNR1BP49286 362 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 REEP5Q00765 189 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 PGGHGQ32M88 737 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 PLA1AQ53H76 456 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 HBMQ6B0K9 141 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 TMEM107Q6UX40 140 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 ZNF782Q6ZMW2 699 aaPredicted RBP13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 PLEKHM3Q6ZWE6 761 aa13.08□□□□□ -0.32
VPS9D1-202ENST00000561976 NRMQ8IXM6 262 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms