RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 DNAL1Q4LDG9 190 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 KRTCAP3Q53RY4 240 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 SH2D4BQ5SQS7 431 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 ZDHHC20Q5W0Z9 365 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 TMEM211Q6ICI0 200 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 IRGCQ6NXR0 463 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 FBXL22Q6P050 247 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 DOK6Q6PKX4 331 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 ZNF474Q6S9Z5 364 aaPredicted RBP2.97□□□□□ -1.93
SPG11-225ENST00000561391 GDPD4Q6W3E5 623 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 ZYG11AQ6WRX3 759 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 RAPH1Q70E73 1250 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 ASRGL1Q7L266 308 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 PIWIL4Q7Z3Z4 852 aaKnown RBP2.97□□□□□ -1.93
SPG11-225ENST00000561391 TBC1D1Q86TI0 1168 aaPredicted RBP2.97□□□□□ -1.93
SPG11-225ENST00000561391 ZC3HC1Q86WB0 502 aaKnown RBP2.97□□□□□ -1.93
SPG11-225ENST00000561391 ARHGAP12Q8IWW6 846 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 ZNF683Q8IZ20 524 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 EID3Q8N140 333 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 PELI3Q8N2H9 469 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 SFRP1Q8N474 314 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 NPWQ8N729 165 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 PAF1Q8N7H5 531 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 IPMKQ8NFU5 416 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 OR10Q1Q8NGQ4 319 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 C10orf82Q8WW14 230 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 TADA1Q96BN2 335 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 ERP27Q96DN0 273 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 HMCESQ96FZ2 354 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 GPR137Q96N19 417 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 RILPQ96NA2 401 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 PSKH2Q96QS6 385 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 NUDCD1Q96RS6 583 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 GPR22Q99680 433 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 MRPL57Q9BQC6 102 aaKnown RBP2.97□□□□□ -1.93
SPG11-225ENST00000561391 SLC7A5P2Q9GIP4 190 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 LHPPQ9H008 270 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 C1orf21Q9H246 121 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 AAMDCQ9H7C9 122 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 PLAC1Q9HBJ0 212 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 POPDC3Q9HBV1 291 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 SYTL2Q9HCH5 934 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 SLCO1B3Q9NPD5 702 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 NRIP3Q9NQ35 241 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 CHRAC1Q9NRG0 131 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 ABCF3Q9NUQ8 709 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 TMEM184CQ9NVA4 438 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 INTS10Q9NVR2 710 aaKnown RBP2.97□□□□□ -1.93
SPG11-225ENST00000561391 TMEM45AQ9NWC5 275 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 SLC17A7Q9P2U7 560 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 FBXL4Q9UKA2 621 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 FBXO5Q9UKT4 447 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 GTF2A1LQ9UNN4 478 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 TMEM98Q9Y2Y6 226 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 RAP2CQ9Y3L5 183 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 WNK1Q9H4A3 2382 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 ANKRD36A6QL64 1941 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 USF3Q68DE3 2245 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 HRNRQ86YZ3 2850 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 DOCK10Q96BY6 2186 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 A0A0D9SEW6 157 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 LOC100653049A0A140TA62 436 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 C17orf113A0A1B0GUU1 675 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 CXorf65A6NEN9 183 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 NPIPB13A6NJU9 1138 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 NPIPB5A8MRT5 1133 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 SYCE1LA8MT33 242 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 C9J4A7 227 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 NPIPB4C9JG80 1138 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 MCIDASD6RGH6 385 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 H3BMM5 538 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 I6L893 689 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 HDAC3O15379 428 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 CD5LO43866 347 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 CIB2O75838 187 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 KRT34O76011 436 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 RECQL5O94762 991 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 POP4O95707 220 aaKnown RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 HSPA4LO95757 839 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 STATHP02808 62 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 RHOCP08134 193 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 HOXC4P09017 264 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 PRR35P0CG20 571 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 TPBGLP0DKB5 382 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 CYP4B1P13584 511 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 PKMP14618 531 aaKnown RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 HOXB9P17482 250 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 TFEBP19484 476 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 OGNP20774 298 aaKnown RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 BGNP21810 368 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 CD9P21926 228 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 ATP5F1P24539 256 aaPredicted RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 PSMA3P25788 255 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 GCKP35557 465 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 TRIM23P36406 574 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 TTPAP49638 278 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 RPL14P50914 215 aaKnown RBP2.96□□□□□ -1.94
SPG11-225ENST00000561391 ZNF81P51508 661 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 CCNG1P51959 295 aa2.96□□□□□ -1.94
SPG11-225ENST00000561391 AQP5P55064 265 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms