RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 PIWIL4Q7Z3Z4 852 aaKnown RBP4.69□□□□□ -1.66
HERC1-213ENST00000561359 OR4N5Q8IXE1 308 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 PALM2Q8IXS6 379 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 FAM71DQ8N9W8 422 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 NEIL2Q969S2 332 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 NXNL1Q96CM4 212 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 MS4A6EQ96DS6 147 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 DTNBP1Q96EV8 351 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 SERINC2Q96SA4 455 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 TRMOQ9BU70 441 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 SUCNR1Q9BXA5 334 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 BPESC1Q9GZL8 116 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 STMN4Q9H169 189 aaPredicted RBP4.69□□□□□ -1.66
HERC1-213ENST00000561359 CDC42EP4Q9H3Q1 356 aaKnown RBP4.69□□□□□ -1.66
HERC1-213ENST00000561359 CHRAC1Q9NRG0 131 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 DDX28Q9NUL7 540 aaKnown RBP4.69□□□□□ -1.66
HERC1-213ENST00000561359 XPR1Q9UBH6 696 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 IKZF3Q9UKT9 509 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 PDE10AQ9Y233 779 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 NPIPA5A0A0B4J1W7 369 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 LRIT2A6NDA9 550 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 OR6C76A6NM76 312 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 VGLL3A8MV65 326 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 BTNL10A8MVZ5 291 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 GOLGA8KD6RF30 607 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 E7EQL1 145 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 NPIPA7E9PJI5 369 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 GOLGA8TH3BQL2 631 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 PSTPIP1O43586 416 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 FGF17O60258 216 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 ZNF500O60304 480 aaPredicted RBP4.68□□□□□ -1.66
HERC1-213ENST00000561359 ABCB1P08183 1280 aaPredicted RBP4.68□□□□□ -1.66
HERC1-213ENST00000561359 HIST1H2AGP0C0S8 130 aaPredicted RBP4.68□□□□□ -1.66
HERC1-213ENST00000561359 RHOXF2BP0C7M4 288 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 NPIPA8P0DM63 369 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 HIST1H2ADP20671 130 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 CNTFP26441 200 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 MGAT1P26572 445 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 IL2RGP31785 369 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 GRIA1P42261 906 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 CHN2P52757 468 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 DVL1P1P54792 670 aaPredicted RBP4.68□□□□□ -1.66
HERC1-213ENST00000561359 CDH15P55291 814 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 RPS3AP61247 264 aaKnown RBP4.68□□□□□ -1.66
HERC1-213ENST00000561359 RPL11P62913 178 aaKnown RBP4.68□□□□□ -1.66
HERC1-213ENST00000561359 UBA52P62987 128 aaKnown RBP4.68□□□□□ -1.66
HERC1-213ENST00000561359 P2RY6Q15077 328 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 STK11Q15831 433 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 VAX1Q5SQQ9 334 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 DEPDC1Q5TB30 811 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 RAET1LQ5VY80 246 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 DUPD1Q68J44 220 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 SLC22A25Q6T423 547 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 CYHR1Q6ZMK1 362 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 TMPRSS11BQ86T26 416 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 GLCCI1Q86VQ1 547 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 PLCZ1Q86YW0 608 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 WDSUB1Q8N9V3 476 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 C7orf57Q8NEG2 295 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 OR8K1Q8NGG5 319 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 OR2W6PQ8NHA6 318 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 SLC5A11Q8WWX8 675 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 PEX13Q92968 403 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 KISS1RQ969F8 398 aaPredicted RBP4.68□□□□□ -1.66
HERC1-213ENST00000561359 GFM2Q969S9 779 aaKnown RBP4.68□□□□□ -1.66
HERC1-213ENST00000561359 MUCL1Q96DR8 90 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 GMPPAQ96IJ6 420 aaPredicted RBP4.68□□□□□ -1.66
HERC1-213ENST00000561359 RADILQ96JH8 1075 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 HIST1H2AHQ96KK5 128 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 OR4K3Q96R72 315 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 SNX18Q96RF0 628 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 CCT8L2Q96SF2 557 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 HIST1H2AJQ99878 128 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 MAPKAP1Q9BPZ7 522 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 H2AFJQ9BTM1 129 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 REXO4Q9GZR2 422 aaKnown RBP4.68□□□□□ -1.66
HERC1-213ENST00000561359 CCDC68Q9H2F9 335 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 MMP27Q9H306 513 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 PARVBQ9HBI1 364 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 ESM1Q9NQ30 184 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 FBXO34Q9NWN3 711 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 FBXL2Q9UKC9 423 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 MAD1L1Q9Y6D9 718 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 SPACA6W5XKT8 324 aa4.68□□□□□ -1.66
HERC1-213ENST00000561359 LOC100653049A0A140TA62 436 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 PRAMEF25A6NGN4 478 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 KRTAP9-7A8MTY7 169 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 EFCAB8A8MWE9 144 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 E7EVH7 732 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 TBX1O43435 398 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 ZIC3O60481 467 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 ZNF189O75820 626 aaPredicted RBP4.67□□□□□ -1.66
HERC1-213ENST00000561359 KRT34O76011 436 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 SNUPNO95149 360 aaKnown RBP4.67□□□□□ -1.66
HERC1-213ENST00000561359 VAPBO95292 243 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 BCL10O95999 233 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 PLA2G1BP04054 148 aaKnown RBP4.67□□□□□ -1.66
HERC1-213ENST00000561359 C8GP07360 202 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 NUDT17P0C025 328 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 ALOX15P16050 662 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms