RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 UBCP0CG48 685 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 CYP19A1P11511 503 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 ATP1B2P14415 290 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 CPN1P15169 458 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 AADACP22760 399 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 ATP5A1P25705 553 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 GIFP27352 417 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 GCAP28676 217 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 HNRNPH3P31942 346 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 CDH5P33151 784 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 CD80P33681 288 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 RORAP35398 523 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 AHRP35869 848 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 SLC26A3P40879 764 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 SLC1A2P43004 574 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 GPR4P46093 362 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 SELENOPP49908 381 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 NOVA1P51513 510 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 SGSHP51688 502 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 EFNB2P52799 333 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 DVL1P1P54792 670 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 PLTPP55058 493 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 STX17P56962 302 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 LINC00310P59036 64 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 PLP1P60201 277 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 RAB10P61026 200 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 PSMC5P62195 406 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 KCNJ2P63252 427 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 UBE2IP63279 158 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 ZXDAP98168 799 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 XIAPP98170 497 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 SP3Q02447 781 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 PAX5Q02548 391 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 RAD51Q06609 339 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 TRAF2Q12933 501 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 ITGB3BPQ13352 177 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 GPR50Q13585 617 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 TFDP1Q14186 410 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 RCAN2Q14206 197 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 RBM39Q14498 530 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 MEF2DQ14814 521 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 PTGR1Q14914 329 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 KIR2DS5Q14953 304 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 CHI3L2Q15782 390 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 VAMP3Q15836 100 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 HLFQ16534 295 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 C3AR1Q16581 482 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 AANATQ16613 207 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 HAGHQ16775 308 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 DUSP6Q16828 381 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 ZNF284Q2VY69 593 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 CCDC14Q49A88 953 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 GGTA1PQ4G0N0 100 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 LINC01620Q4KN68 170 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 DMRTC1Q5HYR2 192 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 CEP78Q5JTW2 689 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 PAPPA-AS1Q5QFB9 102 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 CELF3Q5SZQ8 465 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 ASPHD1Q5U4P2 390 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 OR8G2PQ6IF36 304 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 ZNF585AQ6P3V2 769 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 FAM171BQ6P995 826 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 HSDL2Q6YN16 418 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 ZNF852Q6ZMS4 543 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 TPGS1Q6ZTW0 290 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 LANCL3Q6ZV70 420 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 Q75L30 129 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 CHMP1BQ7LBR1 199 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 APTXQ7Z2E3 356 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 ANKRD37Q7Z713 158 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 FJX1Q86VR8 437 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 SFR1Q86XK3 245 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 GPSM1Q86YR5 675 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 TBC1D10CQ8IV04 446 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 CHERPQ8IWX8 916 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 C12orf56Q8IXR9 622 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 ZBED8Q8IZ13 594 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 ZNF34Q8IZ26 560 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 SPAG16Q8N0X2 631 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 GPC2Q8N158 579 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 PGBD5Q8N414 524 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 TMEM151AQ8N4L1 468 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 MARVELD2Q8N4S9 558 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 FAM89BQ8N5H3 189 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 JAGN1Q8N5M9 183 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 ATP6V0D2Q8N8Y2 350 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 MFSD9Q8NBP5 474 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 SLC37A3Q8NCC5 494 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 FBXO36Q8NEA4 188 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 C7orf57Q8NEG2 295 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 OR10A7Q8NGE5 316 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 OR4D6Q8NGJ1 314 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 OR52N5Q8NH56 324 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 OR1F12Q8NHA8 337 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 PRSS3P2Q8NHM4 247 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 GADD45GIP1Q8TAE8 222 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 Q8TCH9 128 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 LIPHQ8WWY8 451 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 HSD17B8Q92506 261 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 CDKL2Q92772 493 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms