RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 ZNF98A6NK75 572 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 C1QTNF3-AMACRE9PGA6 284 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 H0YC42 278 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 PRKYO43930 277 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 EN2P19622 333 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 FCARP24071 287 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 DNASE1P24855 282 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 GABRA5P31644 462 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 XCR1P46094 333 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 GNA13Q14344 377 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 ANXA8L1Q5VT79 327 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 C12orf73Q69YU5 71 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 CD200R1LQ6Q8B3 271 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 NXPE4Q6UWF7 544 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 FGD2Q7Z6J4 655 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 AQP11Q8NBQ7 271 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 UXS1Q8NBZ7 420 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 VPS37AQ8NEZ2 397 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 OR8J1Q8NGP2 316 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 OR52J3Q8NH60 311 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 SLC5A11Q8WWX8 675 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 CXorf40BQ96DE9 158 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 COX14Q96I36 57 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 WACQ9BTA9 647 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 SFXN1Q9H9B4 322 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 TRPV4Q9HBA0 871 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 CD93Q9NPY3 652 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 PRSS16Q9NQE7 514 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 OBP2AQ9NY56 170 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 COPZ2Q9P299 210 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 HCN2Q9UL51 889 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 PCYT1BQ9Y5K3 369 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 TRDV1A0A1B0GX56 115 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 ABCD4O14678 606 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 OSMP13725 252 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 MAOBP27338 520 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 OPRD1P41143 372 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 GSTM5P46439 218 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 HOXA1P49639 335 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 WNT4P56705 351 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 RBBP4Q09028 425 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 LRRC74AQ0VAA2 488 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 CNTN1Q12860 1018 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 CAMK2DQ13557 499 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 ZNF169Q14929 603 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 FAM109BQ6ICB4 259 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 UNC5DQ6UXZ4 953 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 ADAMTSL4Q6UY14 1074 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 COMMD6Q7Z4G1 85 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 GTPBP3Q969Y2 492 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 CHFRQ96EP1 664 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 TSSK6Q9BXA6 273 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 ZNF436Q9C0F3 470 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 OR52A5Q9H2C5 316 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 DPAGT1Q9H3H5 408 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 ZDHHC4Q9NPG8 344 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 ACER3Q9NUN7 267 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 KCMF1Q9P0J7 381 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 A8MXK9 166 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 RNASET2O00584 256 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 CASKO14936 926 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 AKAP8O43823 692 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 GADD45GO95257 159 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 PAHP00439 452 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 IFNA14P01570 189 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 NR2F6P10588 404 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 ZNF763Q0D2J5 394 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 ILKQ13418 452 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 GAB1Q13480 694 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 RGNQ15493 299 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 ZNF385BQ569K4 471 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 NHLRC3Q5JS37 347 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 SLC25A30Q5SVS4 291 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 PIP5KL1Q5T9C9 394 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 HIST2H2AA3Q6FI13 130 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 TANGO2Q6ICL3 276 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 BHLHB9Q6PI77 547 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 DNAJC5GQ8N7S2 189 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 WDR48Q8TAF3 677 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 SETD7Q8WTS6 366 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 TM9SF4Q92544 642 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 RFT1Q96AA3 541 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 RAB7BQ96AH8 199 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 OTULINQ96BN8 352 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 USB1Q9BQ65 265 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 HDHD2Q9H0R4 259 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 REEP4Q9H6H4 257 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 MCCC2Q9HCC0 563 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 GDE1Q9NZC3 331 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 THAP10Q9P2Z0 257 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 MALT1Q9UDY8 824 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 SF3B6Q9Y3B4 125 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 PRKAB1Q9Y478 270 aa13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 SPIN1Q9Y657 262 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-220ENST00000560998 TMEM129A0AVI4 362 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 KLHL18O94889 574 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 EPHX1P07099 455 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 SULT1A3P0DMM9 295 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 SULT1A4P0DMN0 295 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 ERVK-21P61565 698 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms