RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 SMAD9O15198 467 aaKnown RBP3.31□□□□□ -1.88
HERC1-211ENST00000560983 PHGDHO43175 533 aaKnown RBP3.31□□□□□ -1.88
HERC1-211ENST00000560983 CHST10O43529 356 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 TMPRSS11DO60235 418 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 TRIM3O75382 744 aaPredicted RBP3.31□□□□□ -1.88
HERC1-211ENST00000560983 VPS26AO75436 327 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 GPC4O75487 556 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 TUSC2O75896 110 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 RNF8O76064 485 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 LY6HO94772 140 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 GFPT2O94808 682 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 MYO1DO94832 1006 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 AP2A2O94973 939 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 P04436 131 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 CYP4B1P13584 511 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 UCHL3P15374 230 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 TNFRSF1BP20333 461 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 MAOAP21397 527 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 CCR7P32248 378 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 CDK9P50750 372 aaKnown RBP3.31□□□□□ -1.88
HERC1-211ENST00000560983 RPS13P62277 151 aaKnown RBP3.31□□□□□ -1.88
HERC1-211ENST00000560983 ZNF91Q05481 1191 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 PRDX1Q06830 199 aaKnown RBP3.31□□□□□ -1.88
HERC1-211ENST00000560983 GGTLC2Q14390 218 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 SLC1A5Q15758 541 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 ZNF791Q3KP31 576 aaPredicted RBP3.31□□□□□ -1.88
HERC1-211ENST00000560983 EIPR1Q53HC9 387 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 CCDC183Q5T5S1 534 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 SLC22A10Q63ZE4 541 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 C11orf71Q6IPW1 123 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 KLHL10Q6JEL2 608 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 TMEM65Q6PI78 240 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 RANBP10Q6VN20 620 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 QSOX2Q6ZRP7 698 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 DCDC5Q6ZRR9 648 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 SNX20Q7Z614 316 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 SERPINA9Q86WD7 417 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 PLD3Q8IV08 490 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 DCUN1D3Q8IWE4 304 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 PIANPQ8IYJ0 282 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 SLC22A15Q8IZD6 547 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 PQLC3Q8N755 202 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 CCNYQ8ND76 341 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 CFAP61Q8NHU2 1237 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 PPP1R35Q8TAP8 253 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 MPLKIPQ8TAP9 179 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 MCOLN3Q8TDD5 553 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 PAQR8Q8TEZ7 354 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 ABTB1Q969K4 478 aaPredicted RBP3.31□□□□□ -1.88
HERC1-211ENST00000560983 NCLNQ969V3 563 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 RERGQ96A58 199 aaPredicted RBP3.31□□□□□ -1.88
HERC1-211ENST00000560983 ULK4Q96C45 1275 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 TM4SF19Q96DZ7 209 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 VMP1Q96GC9 406 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 BTBD9Q96Q07 612 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 TRMOQ9BU70 441 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 ACAT2Q9BWD1 397 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 CACNG6Q9BXT2 260 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 TRIM2Q9C040 744 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 KLHL4Q9C0H6 718 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 MMP27Q9H306 513 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 ADAP2Q9NPF8 381 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 HACD3Q9P035 362 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 CLCF1Q9UBD9 225 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 SLC39A10Q9ULF5 831 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 USP22Q9UPT9 525 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 NAALAD2Q9Y3Q0 740 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 RNF115Q9Y4L5 304 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 IKBKGQ9Y6K9 419 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 NOTCH3Q9UM47 2321 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 MALRD1Q5VYJ5 2156 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 ALPK2Q86TB3 2170 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 SCN2AQ99250 2005 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 UBR4Q5T4S7 5183 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 LRP5LA4QPB2 252 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 GOLGA6L4A6NEF3 574 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 GOLGA6L9A6NEM1 432 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 ZNF860A6NHJ4 632 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 HAT1O14929 419 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 CLOCKO15516 846 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 RAMP1O60894 148 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 TRAPPC6AO75865 159 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 C1orf105O95561 183 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 CRHP06850 196 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 KITP10721 976 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 PSG1P11464 419 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 PKMP14618 531 aaKnown RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 EZRP15311 586 aaKnown RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 ZNF23P17027 643 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 GDF1P27539 372 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 CMPK1P30085 196 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 PPP2R1BP30154 601 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 GCH1P30793 250 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 IL2RGP31785 369 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 HTR6P50406 440 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 PNLIPRP1P54315 467 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 CSE1LP55060 971 aaKnown RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 EIF3BP55884 814 aaKnown RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 UBA52P62987 128 aaKnown RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 KCNJ2P63252 427 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms