RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ALKBH4Q9NXW9 302 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 ADAM29Q9UKF5 820 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 EDARQ9UNE0 448 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 NDUFAF1Q9Y375 327 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 MTORP42345 2549 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 GLOD5A6NK44 160 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 OR7A17O14581 309 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 GUCY1B2O75343 617 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 ULK1O75385 1050 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 CPOXP36551 454 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 DLX5P56178 289 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 SLC25A3Q00325 362 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 CRYZQ08257 329 aaKnown RBP12.42□□□□□ -0.42
SMAD3-214ENST00000560402 TRAF3Q13114 568 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 GGTA1PQ4G0N0 100 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 ACSF3Q4G176 576 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-214ENST00000560402 XKR7Q5GH72 579 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 COQ5Q5HYK3 327 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 FRG2Q64ET8 278 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 HACD2Q6Y1H2 254 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 OR7G1Q8NGA0 311 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 SPPL2AQ8TCT8 520 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 ROPN1LQ96C74 230 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 JSRP1Q96MG2 331 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-214ENST00000560402 FRG2BQ96QU4 278 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 KCNA7Q96RP8 456 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 FOXC2Q99958 501 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 PRDM14Q9GZV8 571 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 UBQLN3Q9H347 655 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 RNPEPL1Q9HAU8 725 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 AIG1Q9NVV5 245 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 GID8Q9NWU2 228 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 DNAJB12Q9NXW2 375 aaKnown RBP12.42□□□□□ -0.42
SMAD3-214ENST00000560402 AHSPQ9NZD4 102 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 NOP53Q9NZM5 478 aaKnown RBP12.42□□□□□ -0.42
SMAD3-214ENST00000560402 ZIM2Q9NZV7 527 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 CCDC167Q9P0B6 97 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 EIF3LQ9Y262 564 aaKnown RBP12.42□□□□□ -0.42
SMAD3-214ENST00000560402 CFL2Q9Y281 166 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 C15orf41Q9Y2V0 281 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 RNF11Q9Y3C5 154 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 TIMM22Q9Y584 194 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 NPFFR2Q9Y5X5 522 aa12.42□□□□□ -0.42
SMAD3-214ENST00000560402 SETD2Q9BYW2 2564 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-214ENST00000560402 ITPR3Q14573 2671 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 C15orf38-AP3S2A0A0A6YYH1 394 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 FAM221AA4D161 298 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 MRASO14807 208 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 FKBP6O75344 327 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 CTAG2O75638 210 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 EPPINO95925 133 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 HPNP05981 417 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 MAPK1P28482 360 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 SSTR4P31391 388 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 CEACAM8P31997 349 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-214ENST00000560402 TIMP3P35625 211 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 KIR2DL3P43628 341 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 MASP1P48740 699 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 TRPC1P48995 793 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 CDK9P50750 372 aaKnown RBP12.41□□□□□ -0.42
SMAD3-214ENST00000560402 FOXA1P55317 472 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 DUSP8Q13202 625 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 FLYWCH1Q4VC44 716 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 PDCD4Q53EL6 469 aaKnown RBP12.41□□□□□ -0.42
SMAD3-214ENST00000560402 NHSL2Q5HYW2 709 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 LETMD1Q6P1Q0 360 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 TMEM81Q6P7N7 255 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 ZNF615Q8N8J6 731 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 FNDC5Q8NAU1 212 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 RELL2Q8NC24 303 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-214ENST00000560402 CHDHQ8NE62 594 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-214ENST00000560402 OR4K14Q8NGD5 310 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 OR52B6Q8NGF0 335 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 RNASE6Q93091 150 aaKnown RBP12.41□□□□□ -0.42
SMAD3-214ENST00000560402 DTNBP1Q96EV8 351 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 TMEM41AQ96HV5 264 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 ANGPTL4Q9BY76 406 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 OR10A5Q9H207 317 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 CXXC4Q9H2H0 198 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 ELOVL6Q9H5J4 265 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 DENND2DQ9H6A0 471 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-214ENST00000560402 SDR39U1Q9NRG7 319 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-214ENST00000560402 TEX10Q9NXF1 929 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-214ENST00000560402 STOML1Q9UBI4 398 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 ZNF629Q9UEG4 869 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-214ENST00000560402 DOCK7Q96N67 2140 aa12.41□□□□□ -0.42
SMAD3-214ENST00000560402 PRRC2AP48634 2157 aaKnown RBP12.4□□□□□ -0.42
SMAD3-214ENST00000560402 C1orf226A1L170 272 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 SYT5O00445 386 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 NR5A2O00482 541 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 PPP6CO00743 305 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 PEX11AO75192 247 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 LRATO95237 230 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 GOSR1O95249 250 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 IL2RAP01589 272 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 CPMP14384 443 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 PORP16435 677 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-214ENST00000560402 NAGAP17050 411 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 NT5EP21589 574 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 GCKP35557 465 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms