RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 NRMQ8IXM6 262 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 IL17RCQ8NAC3 791 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 PIGXQ8TBF5 258 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 ADAMTS15Q8TE58 950 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 ZFPM2Q8WW38 1151 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 MCHR1Q99705 422 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 SRRQ9GZT4 340 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 SIAEQ9HAT2 523 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 SF3B6Q9Y3B4 125 aaKnown RBP9.4□□□□□ -0.91
LRRC28-216ENST00000559819 MN1Q10571 1320 aaPredicted RBP9.39□□□□□ -0.91
LRRC28-216ENST00000559819 A0A1W2PQ09 198 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 PRSS38A1L453 326 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 ZNF860A6NHJ4 632 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 KDM4EB2RXH2 506 aaPredicted RBP9.39□□□□□ -0.91
LRRC28-216ENST00000559819 SYT5O00445 386 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 PLRG1O43660 514 aaKnown RBP9.39□□□□□ -0.91
LRRC28-216ENST00000559819 IL7P13232 177 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 FUT1P19526 365 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 MAGEA8P43361 318 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 KIR2DL1P43626 348 aaPredicted RBP9.39□□□□□ -0.91
LRRC28-216ENST00000559819 OR2B6P58173 313 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 STXBP1P61764 594 aaKnown RBP9.39□□□□□ -0.91
LRRC28-216ENST00000559819 FABP5Q01469 135 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 MINDY4Q4G0A6 757 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 ENPP7Q6UWV6 458 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 FAM131AQ6UXB0 335 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 RASSF6Q6ZTQ3 369 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 GALNT12Q8IXK2 581 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 CAMKK1Q8N5S9 505 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 OR1E3Q8WZA6 343 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 TSACCQ96A04 125 aaPredicted RBP9.39□□□□□ -0.91
LRRC28-216ENST00000559819 MOAP1Q96BY2 351 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 PHOX2BQ99453 314 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 ACTRT3Q9BYD9 372 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 HOXD1Q9GZZ0 328 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 FGF20Q9NP95 211 aaPredicted RBP9.39□□□□□ -0.91
LRRC28-216ENST00000559819 MDC1Q14676 2089 aaKnown RBP9.39□□□□□ -0.91
LRRC28-216ENST00000559819 MYO10Q9HD67 2058 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 NPIPA5A0A0B4J1W7 369 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 IQCMA0A1B0GVH7 501 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 A0A1W2PQL4 384 aaPredicted RBP9.39□□□□□ -0.91
LRRC28-216ENST00000559819 HTR3EA5X5Y0 456 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 A8MV72 311 aaPredicted RBP9.39□□□□□ -0.91
LRRC28-216ENST00000559819 NPIPA7E9PJI5 369 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 DYRK3O43781 588 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 NPIPA8P0DM63 369 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 PBX2P40425 430 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 RANBP2P49792 3224 aaKnown RBP9.39□□□□□ -0.91
LRRC28-216ENST00000559819 CDH11P55287 796 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 ERVK-21P61565 698 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 DAB2P98082 770 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 BNC1Q01954 994 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 ST3GAL3Q11203 375 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 RAB40BQ12829 278 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 CEBPEQ15744 281 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 ZNF791Q3KP31 576 aaPredicted RBP9.39□□□□□ -0.91
LRRC28-216ENST00000559819 DEFB134Q4QY38 66 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 TMEM196Q5HYL7 178 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 TMEM31Q5JXX7 168 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 C9orf50Q5SZB4 431 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 MFSD12Q6NUT3 480 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 ZNF836Q6ZNA1 936 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 RRM2BQ7LG56 351 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 MRGPREQ86SM8 312 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 ASPGQ86U10 573 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 OTULINQ96BN8 352 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 SLC41A3Q96GZ6 507 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 SLC38A2Q96QD8 506 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 OR2M4Q96R27 311 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 MMP28Q9H239 520 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 RMI1Q9H9A7 625 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 ZNF624Q9P2J8 865 aaPredicted RBP9.39□□□□□ -0.91
LRRC28-216ENST00000559819 ZNF443Q9Y2A4 671 aaPredicted RBP9.39□□□□□ -0.91
LRRC28-216ENST00000559819 CSNK1G3Q9Y6M4 447 aa9.39□□□□□ -0.91
LRRC28-216ENST00000559819 FAM183AA6NL82 134 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 SOCS6O14544 535 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 CDC42EP2O14613 210 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 NCR1O76036 304 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 EN2P19622 333 aaPredicted RBP9.38□□□□□ -0.91
LRRC28-216ENST00000559819 CPN2P22792 545 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 RUNX2Q13950 521 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 DUSP5Q16690 384 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 PUS10Q3MIT2 529 aaKnown RBP9.38□□□□□ -0.91
LRRC28-216ENST00000559819 PLK5Q496M5 336 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 AGAP6Q5VW22 663 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 PRAMEF8Q5VWM4 474 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 PRAMEF7Q5VXH5 474 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 FBXO42Q6P3S6 717 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 QSOX2Q6ZRP7 698 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 UBE2J2Q8N2K1 259 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 UFD1Q92890 307 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 AGAP4Q96P64 663 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 KATNB1Q9BVA0 655 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 TMED9Q9BVK6 235 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 SARGQ9BW04 601 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 KIR3DX1Q9H7L2 352 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 LYARQ9NX58 379 aaKnown RBP9.38□□□□□ -0.91
LRRC28-216ENST00000559819 SLC7A7Q9UM01 511 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 SNX7Q9UNH6 387 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 LIPT1Q9Y234 373 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms