RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 TUBAL3A6NHL2 446 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 C17orf51A8MQB3 221 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 OR10H2O60403 315 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 ICOSLGO75144 302 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 UGT2B11O75310 529 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 NME6O75414 186 aaPredicted RBP5.26□□□□□ -1.57
USP3-215ENST00000559771 PPM1BO75688 479 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 TNFSF13O75888 250 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 SEMA3DO95025 777 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 KLHL2O95198 593 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 SNX4O95219 450 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 CBX7O95931 251 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 IL18BPO95998 194 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 RAF1P04049 648 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 KLK1P06870 262 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 SBK3P0C264 359 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 MED14OSP0DP75 135 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 CPMP14384 443 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 CPN1P15169 458 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 CHN1P15882 459 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 DRD4P21917 467 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 DNASE1P24855 282 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 CTSSP25774 331 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 CRABP2P29373 138 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 OPRM1P35372 400 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 PEX19P40855 299 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 MAGEA12P43365 314 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 EMDP50402 254 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 LHX2P50458 406 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 XKP51811 444 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 GFRA1P56159 465 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 SORDQ00796 357 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 GALNT1Q10472 559 aaPredicted RBP5.26□□□□□ -1.57
USP3-215ENST00000559771 MAP4K2Q12851 820 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 EXOSC7Q15024 291 aaKnown RBP5.26□□□□□ -1.57
USP3-215ENST00000559771 ACAP2Q15057 778 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 POU4F3Q15319 338 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 NNATQ16517 81 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 TRMT12Q53H54 448 aaKnown RBP5.26□□□□□ -1.57
USP3-215ENST00000559771 TECRLQ5HYJ1 363 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 SPDYAQ5MJ70 313 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 MROH9Q5TGP6 573 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 TMEM198Q66K66 360 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 OR52E8Q6IFG1 317 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 FAM180BQ6P0A1 224 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 ANGPTL8Q6UXH0 198 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 C22orf34Q6ZV56 151 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 RAPH1Q70E73 1250 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 Q71RC1 249 aaPredicted RBP5.26□□□□□ -1.57
USP3-215ENST00000559771 CAMKMTQ7Z624 323 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 TBC1D1Q86TI0 1168 aaPredicted RBP5.26□□□□□ -1.57
USP3-215ENST00000559771 YRDCQ86U90 279 aaKnown RBP5.26□□□□□ -1.57
USP3-215ENST00000559771 EXOC3L1Q86VI1 746 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 CCDC25Q86WR0 208 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 NUDT13Q86X67 352 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 MYLK4Q86YV6 388 aaPredicted RBP5.26□□□□□ -1.57
USP3-215ENST00000559771 GALNT12Q8IXK2 581 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 TAGAPQ8N103 731 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 METTL4Q8N3J2 472 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 LIX1Q8N485 282 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 ZPLD1Q8TCW7 415 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 ABTB1Q969K4 478 aaPredicted RBP5.26□□□□□ -1.57
USP3-215ENST00000559771 ARSGQ96EG1 525 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 CNRIP1Q96F85 164 aaPredicted RBP5.26□□□□□ -1.57
USP3-215ENST00000559771 ZNF681Q96N22 645 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 CITED4Q96RK1 184 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 TRIB1Q96RU8 372 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 ITPAQ9BY32 194 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 MRPL1Q9BYD6 325 aaKnown RBP5.26□□□□□ -1.57
USP3-215ENST00000559771 NOL11Q9H8H0 719 aaKnown RBP5.26□□□□□ -1.57
USP3-215ENST00000559771 ANKRA2Q9H9E1 313 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 SNX15Q9NRS6 342 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 FARSBQ9NSD9 589 aaKnown RBP5.26□□□□□ -1.57
USP3-215ENST00000559771 GALNT8Q9NY28 637 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 NKIRAS1Q9NYS0 192 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 NINJ2Q9NZG7 142 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 TXNDC16Q9P2K2 825 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 CLCF1Q9UBD9 225 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 FOXD3Q9UJU5 478 aaPredicted RBP5.26□□□□□ -1.57
USP3-215ENST00000559771 CAMK2AQ9UQM7 478 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 PCDHA9Q9Y5H5 950 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 CUBNO60494 3623 aa5.26□□□□□ -1.57
USP3-215ENST00000559771 FN1P02751 2386 aaKnown RBP5.26□□□□□ -1.57
USP3-215ENST00000559771 FBN1P35555 2871 aaKnown RBP5.26□□□□□ -1.57
USP3-215ENST00000559771 ABCA4P78363 2273 aa5.25□□□□□ -1.57
USP3-215ENST00000559771 PCNX3Q9H6A9 2034 aa5.25□□□□□ -1.57
USP3-215ENST00000559771 A0A087X1B8 175 aa5.25□□□□□ -1.57
USP3-215ENST00000559771 A0A096LPK6 155 aa5.25□□□□□ -1.57
USP3-215ENST00000559771 LOC100289279A0A1B0GTE1 492 aa5.25□□□□□ -1.57
USP3-215ENST00000559771 CCDC189A1A4V9 331 aa5.25□□□□□ -1.57
USP3-215ENST00000559771 CLCA1A8K7I4 914 aa5.25□□□□□ -1.57
USP3-215ENST00000559771 SYCE1LA8MT33 242 aa5.25□□□□□ -1.57
USP3-215ENST00000559771 DEFB108AA8MXU0 73 aa5.25□□□□□ -1.57
USP3-215ENST00000559771 EEF1E1-BLOC1S5C9J1V9 151 aa5.25□□□□□ -1.57
USP3-215ENST00000559771 TP53I11O14683 189 aa5.25□□□□□ -1.57
USP3-215ENST00000559771 TO15178 435 aa5.25□□□□□ -1.57
USP3-215ENST00000559771 EEF1E1O43324 174 aaKnown RBP5.25□□□□□ -1.57
USP3-215ENST00000559771 ZIC3O60481 467 aa5.25□□□□□ -1.57
USP3-215ENST00000559771 RCBTB2O95199 551 aa5.25□□□□□ -1.57
USP3-215ENST00000559771 CLDN9O95484 217 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms