RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 DBIP07108 87 aaKnown RBP11.78□□□□□ -0.52
USP3-213ENST00000559711 IL7RP16871 459 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 EPHA2P29317 976 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 TRHRP34981 398 aaPredicted RBP11.78□□□□□ -0.52
USP3-213ENST00000559711 DAB2P98082 770 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 CD47Q08722 323 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 RAPSNQ13702 412 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 SEC23BQ15437 767 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 MAPK14Q16539 360 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 C6orf141Q5SZD1 244 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 SLITRK4Q8IW52 837 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 PARP8Q8N3A8 854 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 RCBTB1Q8NDN9 531 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 SETD9Q8NE22 299 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 OR9Q2Q8NGE9 314 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 SLC7A13Q8TCU3 470 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 HDAC2Q92769 488 aaKnown RBP11.78□□□□□ -0.52
USP3-213ENST00000559711 HRASLS5Q96KN8 279 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 NIPSNAP1Q9BPW8 284 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 CNPPD1Q9BV87 410 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 FNDC11Q9BVV2 318 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 OR10A5Q9H207 317 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 ZNF556Q9HAH1 456 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 MKKSQ9NPJ1 570 aaPredicted RBP11.78□□□□□ -0.52
USP3-213ENST00000559711 MAN2C1Q9NTJ4 1040 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 SIDT1Q9NXL6 827 aaKnown RBP11.78□□□□□ -0.52
USP3-213ENST00000559711 KCNE5Q9UJ90 142 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 ERVK-19Q9WJR5 959 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 PCDHGB2Q9Y5G2 931 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 UNC13CQ8NB66 2214 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 CENPVL1A0A0U1RR11 272 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 TCRBV16S1A1N1A0A5B0 115 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 SH3PXD2BA1X283 911 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 C17orf105B2RV13 164 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 UGT2B17O75795 530 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 ADAP00813 363 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 GASTP01350 101 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 CT45A8P0DMV1 189 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 CT45A9P0DMV2 189 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 NID1P14543 1247 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 TNNI3P19429 210 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 RORAP35398 523 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 PGDP52209 483 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 TPD52P55327 224 aaPredicted RBP11.78□□□□□ -0.52
USP3-213ENST00000559711 RPP38P78345 283 aaKnown RBP11.78□□□□□ -0.52
USP3-213ENST00000559711 GPR68Q15743 365 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 CTU2Q2VPK5 515 aaKnown RBP11.78□□□□□ -0.52
USP3-213ENST00000559711 LIN52Q52LA3 116 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 EIPR1Q53HC9 387 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 CT45A2Q5DJT8 189 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 FGD3Q5JSP0 725 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 RBM48Q5RL73 367 aaKnown RBP11.78□□□□□ -0.52
USP3-213ENST00000559711 ARHGAP40Q5TG30 622 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 C1orf189Q5VU69 101 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 FIGNL1Q6PIW4 674 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 NPSR1Q6W5P4 371 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 ZNF836Q6ZNA1 936 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 LINC00471Q8N535 108 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 AQP11Q8NBQ7 271 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 C16orf52Q8NHV5 167 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 ADAMTS16Q8TE57 1224 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 SENP5Q96HI0 755 aaPredicted RBP11.78□□□□□ -0.52
USP3-213ENST00000559711 OR6C1Q96RD1 312 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 GFM1Q96RP9 751 aaKnown RBP11.78□□□□□ -0.52
USP3-213ENST00000559711 TGIF2Q9GZN2 237 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 ARRDC1-AS1Q9H2J1 176 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 SMOC1Q9H4F8 434 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 SLC22A11Q9NSA0 550 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 PRODH2Q9UF12 536 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 ENOPH1Q9UHY7 261 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 RARRES3Q9UL19 164 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 MGAT4BQ9UQ53 548 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 DTX4Q9Y2E6 619 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 GMPPBQ9Y5P6 360 aa11.78□□□□□ -0.52
USP3-213ENST00000559711 TTC28Q96AY4 2481 aa11.77□□□□□ -0.52
USP3-213ENST00000559711 IGLV3-12A0A075B6K2 115 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 A0A087WXM4 84 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 SYNDIG1LA6NDD5 238 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 KHNYNO15037 678 aaKnown RBP11.77□□□□□ -0.53
USP3-213ENST00000559711 ONECUT2O95948 504 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 CYP4B1P13584 511 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 ATP6V1B1P15313 513 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 ELK4P28324 431 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 EFNA3P52797 238 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 NR1H2P55055 460 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 ELAVL1Q15717 326 aaKnown RBP11.77□□□□□ -0.53
USP3-213ENST00000559711 MEP1AQ16819 746 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 MINDY4Q4G0A6 757 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 VWA2Q5GFL6 755 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 RNF220Q5VTB9 566 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 LAIR2Q6ISS4 152 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 COX15Q7KZN9 410 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 BPHLQ86WA6 291 aaPredicted RBP11.77□□□□□ -0.53
USP3-213ENST00000559711 TMEM151BQ8IW70 566 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 PLPP5Q8NEB5 264 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 DIO2Q92813 273 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 TSLPQ969D9 159 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 APOL4Q9BPW4 351 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 DGCR6LQ9BY27 220 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 FAM192AQ9GZU8 254 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms