RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 PDK1Q15118 436 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 CLPPQ16740 277 aaPredicted RBP2.39□□□□□ -2.03
SPG11-206ENST00000558093 HAGHQ16775 308 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 LCE3AQ5TA76 89 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 SEL1L2Q5TEA6 688 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 CENPPQ6IPU0 288 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 RHBDD2Q6NTF9 364 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 GPR142Q7Z601 462 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 ERICH1Q86X53 443 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 STHQ8IWL8 128 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 FBXO16Q8IX29 292 aaPredicted RBP2.39□□□□□ -2.03
SPG11-206ENST00000558093 SFRP1Q8N474 314 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 HDDC3Q8N4P3 179 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 TRIML2Q8N7C3 387 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 Q8N9G6 341 aaPredicted RBP2.39□□□□□ -2.03
SPG11-206ENST00000558093 NEK11Q8NG66 645 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 OR2L5Q8NG80 312 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 FAF2Q96CS3 445 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 EPSTI1Q96J88 318 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 PIWIL1Q96J94 861 aaKnown RBP2.39□□□□□ -2.03
SPG11-206ENST00000558093 C8orf76Q96K31 380 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 BCL7BQ9BQE9 202 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 ERP44Q9BS26 406 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 TRIM9Q9C026 710 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 ABCG8Q9H221 673 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 HSD3B7Q9H2F3 369 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 DCTPP1Q9H773 170 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 RPRD1BQ9NQG5 326 aaKnown RBP2.39□□□□□ -2.03
SPG11-206ENST00000558093 DDX28Q9NUL7 540 aaKnown RBP2.39□□□□□ -2.03
SPG11-206ENST00000558093 ACOXLQ9NUZ1 547 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 COX16Q9P0S2 106 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 IL19Q9UHD0 177 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 STX8Q9UNK0 236 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 LIPT1Q9Y234 373 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 PLEKHA6Q9Y2H5 1048 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 ASB3Q9Y575 518 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 IGHV3-35A0A0C4DH35 117 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 SYCE3A1L190 88 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 NCF1BA6NI72 391 aaPredicted RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 NCF1CA8MVU1 366 aaPredicted RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 H0YHG0 523 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 L7N2F9 121 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 CYB561D2O14569 222 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 CDX4O14627 284 aaPredicted RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 SH2D1BO14796 132 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 ZNF263O14978 683 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 POLR2DO15514 142 aaKnown RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 CFLARO15519 480 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 VEGFDO43915 354 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 ERLIN1O75477 346 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 IDH1O75874 414 aaKnown RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 PDE5AO76074 875 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 SLITRK3O94933 977 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 DUSP14O95147 198 aaKnown RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 TXNDC12O95881 172 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 IGHV3-9P01782 118 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 S100A6P06703 90 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 RHOXF2BP0C7M4 288 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 LAMP1P11279 417 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 ZNF24P17028 368 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 VCLP18206 1134 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 IL10P22301 178 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 ADSSP30520 456 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 RFC4P35249 363 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 P2RY4P51582 365 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 SMSP52788 366 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 AP3M2P53677 418 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 ATXN3P54252 364 aaPredicted RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 HADHBP55084 474 aaKnown RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 GMFBP60983 142 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 RPS4XP62701 263 aaKnown RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 HERV-K104P63124 156 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 ELP6Q0PNE2 266 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 DOC2AQ14183 400 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 CAPRIN1Q14444 709 aaKnown RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 ZSCAN26Q16670 478 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 HADHQ16836 314 aaKnown RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 HFEQ30201 348 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 KCTD21Q4G0X4 260 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 AARDQ4LEZ3 155 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 PAN3Q58A45 887 aaKnown RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 HERC4Q5GLZ8 1057 aaPredicted RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 MS4A13Q5J8X5 152 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 GLRA4Q5JXX5 417 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 C1orf185Q5T7R7 199 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 ZNF658Q5TYW1 1059 aaPredicted RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 MFSD7Q6UXD7 560 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 STOX1Q6ZVD7 989 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 BNIPLQ7Z465 357 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 APOBEC3FQ8IUX4 373 aaKnown RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 CNTN4Q8IWV2 1026 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 SIDT2Q8NBJ9 832 aaKnown RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 CNNM3Q8NE01 707 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 OR4A16Q8NH70 328 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 RFESDQ8TAC1 157 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 CCDC110Q8TBZ0 833 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 ACMSDQ8TDX5 336 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 SLC5A11Q8WWX8 675 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 RAB7BQ96AH8 199 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 MRPL53Q96EL3 112 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms