RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 OR6C70A6NIJ9 312 aa19.56■□□□□ 0.72
CASC4-204ENST00000557945 FXYD1O00168 92 aa19.56■□□□□ 0.72
CASC4-204ENST00000557945 HS6ST1O60243 411 aa19.56■□□□□ 0.72
CASC4-204ENST00000557945 ABCB7O75027 752 aa19.56■□□□□ 0.72
CASC4-204ENST00000557945 IL33O95760 270 aa19.56■□□□□ 0.72
CASC4-204ENST00000557945 IGKV1D-16P01601 117 aa19.56■□□□□ 0.72
CASC4-204ENST00000557945 ESRRAP11474 423 aaPredicted RBP19.56■□□□□ 0.72
CASC4-204ENST00000557945 ATP6V1C1P21283 382 aa19.56■□□□□ 0.72
CASC4-204ENST00000557945 DSTNP60981 165 aa19.56■□□□□ 0.72
CASC4-204ENST00000557945 FADDQ13158 208 aa19.56■□□□□ 0.72
CASC4-204ENST00000557945 EFR3AQ14156 821 aa19.56■□□□□ 0.72
CASC4-204ENST00000557945 NANOGP8Q6NSW7 305 aa19.56■□□□□ 0.72
CASC4-204ENST00000557945 GOLM1Q8NBJ4 401 aa19.56■□□□□ 0.72
CASC4-204ENST00000557945 G6PC3Q9BUM1 346 aa19.56■□□□□ 0.72
CASC4-204ENST00000557945 NANOGQ9H9S0 305 aa19.56■□□□□ 0.72
CASC4-204ENST00000557945 ITPR1Q14643 2758 aa19.56■□□□□ 0.72
CASC4-204ENST00000557945 PIEZO2Q9H5I5 2752 aa19.56■□□□□ 0.72
CASC4-204ENST00000557945 AK1P00568 194 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 P04436 131 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 SP1P08047 785 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 CYP4B1P13584 511 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 PNLIPRP2P54317 469 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 RPP38P78345 283 aaKnown RBP19.55■□□□□ 0.72
CASC4-204ENST00000557945 SELPLGQ14242 412 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 NADK2Q4G0N4 442 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 GPAT3Q53EU6 434 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 ZNF766Q5HY98 468 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 SLC25A25Q6KCM7 469 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 Q6ZS92 163 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 TEX19Q8NA77 164 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 PSD4Q8NDX1 1056 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 FAM110BQ8TC76 370 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 HGDQ93099 445 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 TMCO6Q96DC7 493 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 NSL1Q96IY1 281 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 SH3GL1Q99961 368 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 HES7Q9BYE0 225 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 FBXO34Q9NWN3 711 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 B3GNT3Q9Y2A9 372 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 GMEB1Q9Y692 573 aa19.55■□□□□ 0.72
CASC4-204ENST00000557945 CCL3P10147 92 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 NR2F1P10589 423 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 GPX2P18283 190 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 HPCAP84074 193 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 MXRA7P84157 204 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 ZNF169Q14929 603 aaPredicted RBP19.54■□□□□ 0.72
CASC4-204ENST00000557945 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.54■□□□□ 0.72
CASC4-204ENST00000557945 ARHGAP11BQ3KRB8 267 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 RABL3Q5HYI8 236 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 GCNT6Q5T4J0 391 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 PRAMEF20Q5VT98 475 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 SLC22A10Q63ZE4 541 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 SLC6A19Q695T7 634 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 HEPHL1Q6MZM0 1159 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 PTRH1Q86Y79 214 aaKnown RBP19.54■□□□□ 0.72
CASC4-204ENST00000557945 CHDHQ8NE62 594 aaPredicted RBP19.54■□□□□ 0.72
CASC4-204ENST00000557945 OR8J3Q8NGG0 315 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 SPPL2AQ8TCT8 520 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 PAQR8Q8TEZ7 354 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 NODALQ96S42 347 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 SDF2Q99470 211 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 SACM1LQ9NTJ5 587 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 THUMPD1Q9NXG2 353 aaKnown RBP19.54■□□□□ 0.72
CASC4-204ENST00000557945 LUZP4Q9P127 313 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 P2RX2Q9UBL9 471 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 LIPT1Q9Y234 373 aa19.54■□□□□ 0.72
CASC4-204ENST00000557945 CHCHD2Q9Y6H1 151 aaPredicted RBP19.54■□□□□ 0.72
CASC4-204ENST00000557945 TMEM247A6NEH6 219 aa19.53■□□□□ 0.72
CASC4-204ENST00000557945 G3V3Y1 287 aa19.53■□□□□ 0.72
CASC4-204ENST00000557945 ATXN7O15265 892 aaPredicted RBP19.53■□□□□ 0.72
CASC4-204ENST00000557945 SLC28A2O43868 658 aa19.53■□□□□ 0.72
CASC4-204ENST00000557945 UTS2O95399 124 aa19.53■□□□□ 0.72
CASC4-204ENST00000557945 NUDT7P0C024 238 aa19.53■□□□□ 0.72
CASC4-204ENST00000557945 MNAT1P51948 309 aa19.53■□□□□ 0.72
CASC4-204ENST00000557945 HACD2Q6Y1H2 254 aa19.53■□□□□ 0.72
CASC4-204ENST00000557945 OLIG3Q7RTU3 272 aa19.53■□□□□ 0.72
CASC4-204ENST00000557945 ZAR1Q86SH2 424 aa19.53■□□□□ 0.72
CASC4-204ENST00000557945 C10orf111Q8N326 155 aa19.53■□□□□ 0.72
CASC4-204ENST00000557945 ANKFN1Q8N957 763 aa19.53■□□□□ 0.72
CASC4-204ENST00000557945 TMEM178AQ8NBL3 297 aa19.53■□□□□ 0.72
CASC4-204ENST00000557945 METTL7AQ9H8H3 244 aa19.53■□□□□ 0.72
CASC4-204ENST00000557945 SH2D2AQ9NP31 389 aa19.53■□□□□ 0.72
CASC4-204ENST00000557945 CNIH4Q9P003 139 aa19.53■□□□□ 0.72
CASC4-204ENST00000557945 KLF13Q9Y2Y9 288 aaPredicted RBP19.53■□□□□ 0.72
CASC4-204ENST00000557945 C15orf38-AP3S2A0A0A6YYH1 394 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 PRAMEF27A3QJZ7 478 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 CCT8L1PA6NM43 557 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 NME2P1O60361 137 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 ICOSLGO75144 302 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 TNFRSF21O75509 655 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 STX11O75558 287 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 NME2P22392 152 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 GPR85P60893 370 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 FUT5Q11128 374 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 SYPL1Q16563 259 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 CYP51A1Q16850 503 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 PLEKHN1Q494U1 663 aaPredicted RBP19.52■□□□□ 0.72
CASC4-204ENST00000557945 FLYWCH1Q4VC44 716 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 COLEC12Q5KU26 742 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 GALNTL5Q7Z4T8 443 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms