RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 FUT5Q11128 374 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 LASP1Q14847 261 aaKnown RBP11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 ZNF311Q5JNZ3 666 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 ZNF697Q5TEC3 545 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 LHX8Q68G74 356 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 TMEM64Q6YI46 380 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 IDO2Q6ZQW0 420 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 DEFB128Q7Z7B8 93 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 KCTD12Q96CX2 325 aaKnown RBP11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 NUS1Q96E22 293 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 DPH7Q9BTV6 452 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 JAM3Q9BX67 310 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 OR52A5Q9H2C5 316 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 PPIL3Q9H2H8 161 aaKnown RBP11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 ANKRD19PQ9H560 264 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 DDX31Q9H8H2 851 aaKnown RBP11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 SPHK2Q9NRA0 654 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 SEMA4GQ9NTN9 838 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 PTTG3PQ9NZH4 202 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 ELF5Q9UKW6 265 aaPredicted RBP11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 MGAT4AQ9UM21 535 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 GPR34Q9UPC5 381 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 CACNG2Q9Y698 323 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 TEX51A0A1B0GUA7 166 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 C7orf66A4D0T2 115 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 H7BY64 318 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 LANCL1O43813 399 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 PAPLNO95428 1278 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 POU3F3P20264 500 aaPredicted RBP11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 AHCYP23526 432 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 FPR3P25089 353 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 ACSL1P33121 698 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 RFX3P48380 749 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 PITPNBP48739 271 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 TAS2R38P59533 333 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 PGGHGQ32M88 737 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 TOR2AQ5JU69 321 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 NDUFAF5Q5TEU4 345 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 HACD4Q5VWC8 232 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 PRAMEF8Q5VWM4 474 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 FAM46CQ5VWP2 391 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 PRAMEF7Q5VXH5 474 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 OR4C11Q6IEV9 310 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 B3GLCTQ6Y288 498 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 TIGD4Q8IY51 512 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 SLC38A6Q8IZM9 456 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 SFXN5Q8TD22 340 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 PRAP1Q96NZ9 151 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 ARHGDIGQ99819 225 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 FAIM2Q9BWQ8 316 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 OSGEPL1Q9H4B0 414 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 TDP1Q9NUW8 608 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 ZNF222Q9UK12 451 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 A0A0G2JN53 185 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 MEN1O00255 615 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 TGM5O43548 720 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 OR1F1O43749 312 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 HMGN1P05114 100 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 HMGN2P05204 90 aaKnown RBP11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 ANXA3P12429 323 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 SSR2P43308 183 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 ARHGAP19Q14CB8 494 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 GPR162Q16538 588 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 NTRK2Q16620 822 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 LY6G5CQ5SRR4 150 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 CDC73Q6P1J9 531 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 SMARCD3Q6STE5 483 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 TEX261Q6UWH6 196 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 ZNF765Q7L2R6 523 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 UBE3DQ7Z6J8 389 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 LUZP2Q86TE4 346 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 OAFQ86UD1 273 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 REM2Q8IYK8 340 aaPredicted RBP11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 SAMD12Q8N8I0 201 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 SPERTQ8NA61 448 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 BBS1Q8NFJ9 593 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 TFGQ92734 400 aaPredicted RBP11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 DIO2Q92813 273 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 CLIP3Q96DZ5 547 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 SCMH1Q96GD3 660 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 FCRL4Q96PJ5 515 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 PITHD1Q9GZP4 211 aaPredicted RBP11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 PCBD2Q9H0N5 130 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 QRSL1Q9H0R6 528 aaKnown RBP11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 DPAGT1Q9H3H5 408 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 IL20Q9NYY1 176 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 GLTPQ9NZD2 209 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 MARK1Q9P0L2 795 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 ZNF624Q9P2J8 865 aaPredicted RBP11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 EIF3KQ9UBQ5 218 aaKnown RBP11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 PRKAG2Q9UGJ0 569 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 SPEF1Q9Y4P9 236 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 U3KQ87 197 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 DVL2O14641 736 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 KIAA0355O15063 1070 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 EEF1E1O43324 174 aaKnown RBP11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 FRS3O43559 492 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 CXCL10P02778 98 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 EIF4EP06730 217 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms