RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 LINC00471Q8N535 108 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 SLC5A8Q8N695 610 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 ZNF615Q8N8J6 731 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 OR4D11Q8NGI4 311 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 OR6T1Q8NGN1 323 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 C16orf52Q8NHV5 167 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 PTPMT1Q8WUK0 201 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-233ENST00000557529 DAZLQ92904 295 aaKnown RBP11.59□□□□□ -0.55
SHMT2-233ENST00000557529 ZG16BQ96DA0 208 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 RMND5BQ96G75 393 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-233ENST00000557529 SENP5Q96HI0 755 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-233ENST00000557529 SLC46A1Q96NT5 459 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 G6PC3Q9BUM1 346 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 FNDC11Q9BVV2 318 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 YTHDF1Q9BYJ9 559 aaKnown RBP11.59□□□□□ -0.55
SHMT2-233ENST00000557529 VN1R1Q9GZP7 353 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 ZNF556Q9HAH1 456 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 MKL2Q9ULH7 1088 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 MYRFQ9Y2G1 1151 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 POFUT2Q9Y2G5 429 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 CLCA3PQ9Y6N3 262 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 SCN2AQ99250 2005 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 TTC28Q96AY4 2481 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 KMT2EQ8IZD2 1858 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 LOC100130705A0A1B0GUX0 176 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 A0A1W2PRQ8 180 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 EIF4E1BA6NMX2 242 aaKnown RBP11.58□□□□□ -0.56
SHMT2-233ENST00000557529 MITFO75030 526 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-233ENST00000557529 ZNF806P0C7X5 589 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 NID1P14543 1247 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 PSMD4P55036 377 aaKnown RBP11.58□□□□□ -0.56
SHMT2-233ENST00000557529 RGS8P57771 180 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-233ENST00000557529 EEF1A1P68104 462 aaKnown RBP11.58□□□□□ -0.56
SHMT2-233ENST00000557529 IL1RL1Q01638 556 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 DGCR6Q14129 220 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 FGD3Q5JSP0 725 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 DCST1Q5T197 706 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 RNF220Q5VTB9 566 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 TTC33Q6PID6 262 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-233ENST00000557529 FIGNL1Q6PIW4 674 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 ZNF836Q6ZNA1 936 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 COX15Q7KZN9 410 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 THAP5Q7Z6K1 395 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 GALNT5Q7Z7M9 940 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 HMGN2P46Q86SG4 172 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 RBM45Q8IUH3 476 aaKnown RBP11.58□□□□□ -0.56
SHMT2-233ENST00000557529 OFCC1Q8IZS5 231 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 SETD9Q8NE22 299 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 FEVQ99581 238 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 POLR2J2Q9GZM3 115 aaKnown RBP11.58□□□□□ -0.56
SHMT2-233ENST00000557529 POLR2J3Q9H1A7 115 aaKnown RBP11.58□□□□□ -0.56
SHMT2-233ENST00000557529 RIBC2Q9H4K1 309 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 SOX17Q9H6I2 414 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-233ENST00000557529 PAPOLBQ9NRJ5 636 aaKnown RBP11.58□□□□□ -0.56
SHMT2-233ENST00000557529 SLC22A11Q9NSA0 550 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 OCIAD1Q9NX40 245 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 AKAP7Q9P0M2 348 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-233ENST00000557529 RHCGQ9UBD6 479 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 CTSFQ9UBX1 484 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 A4GNTQ9UNA3 340 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 PCDHGB5Q9Y5G0 923 aa11.58□□□□□ -0.56
SHMT2-233ENST00000557529 FAM86C2PA6NEL3 165 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 H3BNH8 94 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 AP3D1O14617 1153 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 BCKDKO14874 412 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 PCDH17O14917 1159 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 POLR1CO15160 346 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-233ENST00000557529 CPNE3O75131 537 aaKnown RBP11.57□□□□□ -0.56
SHMT2-233ENST00000557529 SEMA7AO75326 666 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 TIAF1O95411 115 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 CLIC3O95833 236 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 CLPSP04118 112 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 IGKV3-11P04433 115 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 CYC1P08574 325 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 ZGLP1P0C6A0 271 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 CCNYL3P0C7X3 344 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 AGXTP21549 392 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 CBLP22681 906 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 ELAVL4P26378 380 aaKnown RBP11.57□□□□□ -0.56
SHMT2-233ENST00000557529 PIGAP37287 484 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 SLC37A1P57057 533 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 TAS2R41P59536 307 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 DCAF7P61962 342 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 MC2RQ01718 297 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 KEAP1Q14145 624 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 NPTX1Q15818 432 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 KCTD21Q4G0X4 260 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 FLYWCH1Q4VC44 716 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 NPSR1Q6W5P4 371 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 OVCH1Q7RTY7 1134 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 B3GNT8Q7Z7M8 397 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 ZNF786Q8N393 782 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 CLIP4Q8N3C7 705 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 BMPERQ8N8U9 685 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 SLC38A9Q8NBW4 561 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 MORN4Q8NDC4 146 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 STT3BQ8TCJ2 826 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 OIT3Q8WWZ8 545 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 ATOH1Q92858 354 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-233ENST00000557529 MUS81Q96NY9 551 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms