RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 CDC26Q8NHZ8 85 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 ZNF675Q8TD23 568 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 APIPQ96GX9 242 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 PIP5K1AQ99755 562 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 FAIM2Q9BWQ8 316 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 RAB17Q9H0T7 212 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 ZNF226Q9NYT6 803 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 ALPK2Q86TB3 2170 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 MANBAO00462 879 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 PCDH7O60245 1069 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 AQP8O94778 261 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 CGAP01215 116 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 THBDP07204 575 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 RBP1P09455 135 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 PEPDP12955 493 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 EVI2BP34910 448 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 PTH2RP49190 550 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 CAV1Q03135 178 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 EFR3AQ14156 821 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 PON3Q15166 354 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 CCDC91Q7Z6B0 441 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 MEIOBQ8N635 442 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 FADS6Q8N9I5 356 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 RNF138Q8WVD3 245 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 MTBPQ96DY7 904 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 BDH2Q9BUT1 245 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 ZDHHC18Q9NUE0 388 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 PSME2Q9UL46 239 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 OR10H1Q9Y4A9 318 aa12.68□□□□□ -0.38
SLIRP-210ENST00000557431 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.67□□□□□ -0.38
SLIRP-210ENST00000557431 CCDC189A1A4V9 331 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 OR2M5A3KFT3 312 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 FAM171A2A8MVW0 826 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 TRIM49D1C9J1S8 452 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 POC1B-GALNT4F8VUJ3 575 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 ABCB7O75027 752 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 CNOT4O95628 575 aaKnown RBP12.67□□□□□ -0.38
SLIRP-210ENST00000557431 OTCP00480 354 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 OPN1LWP04000 364 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 PNLIPRP2P54317 469 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 DSCR4P56555 118 aaPredicted RBP12.67□□□□□ -0.38
SLIRP-210ENST00000557431 PSG6Q00889 435 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 ERCC6LQ2NKX8 1250 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 UNC50Q53HI1 259 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 LGSNQ5TDP6 509 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 OR2A2Q6IF42 318 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 METTL2BQ6P1Q9 378 aaKnown RBP12.67□□□□□ -0.38
SLIRP-210ENST00000557431 MARCH3Q86UD3 253 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 C16orf78Q8WTQ4 265 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 KCNA7Q96RP8 456 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 PAFAH2Q99487 392 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 NPAS1Q99742 590 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 LRRC1Q9BTT6 524 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 ACPTQ9BZG2 426 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 CDC42EP4Q9H3Q1 356 aaKnown RBP12.67□□□□□ -0.38
SLIRP-210ENST00000557431 ACSS3Q9H6R3 686 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 BRF2Q9HAW0 419 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 SENP1Q9P0U3 644 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 VPS29Q9UBQ0 182 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 MCM8Q9UJA3 840 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 SNX6Q9UNH7 406 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 PROCRQ9UNN8 238 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 TIMM22Q9Y584 194 aa12.67□□□□□ -0.38
SLIRP-210ENST00000557431 GNG14A0A1W2PPG7 69 aa12.66□□□□□ -0.38
SLIRP-210ENST00000557431 C16orf97H3BN30 126 aa12.66□□□□□ -0.38
SLIRP-210ENST00000557431 JUNP05412 331 aaKnown RBP12.66□□□□□ -0.38
SLIRP-210ENST00000557431 INHBAP08476 426 aa12.66□□□□□ -0.38
SLIRP-210ENST00000557431 FPR1P21462 350 aa12.66□□□□□ -0.38
SLIRP-210ENST00000557431 HSD17B3P37058 310 aa12.66□□□□□ -0.38
SLIRP-210ENST00000557431 SLC6A8P48029 635 aa12.66□□□□□ -0.38
SLIRP-210ENST00000557431 PPP2R2BQ00005 443 aa12.66□□□□□ -0.38
SLIRP-210ENST00000557431 CLCQ05315 142 aa12.66□□□□□ -0.38
SLIRP-210ENST00000557431 ALKBH2Q6NS38 261 aa12.66□□□□□ -0.38
SLIRP-210ENST00000557431 GALNT10Q86SR1 603 aa12.66□□□□□ -0.38
SLIRP-210ENST00000557431 FAM9CQ8IZT9 166 aa12.66□□□□□ -0.38
SLIRP-210ENST00000557431 TMEM151AQ8N4L1 468 aa12.66□□□□□ -0.38
SLIRP-210ENST00000557431 TMEM237Q96Q45 408 aa12.66□□□□□ -0.38
SLIRP-210ENST00000557431 RNF122Q9H9V4 155 aa12.66□□□□□ -0.38
SLIRP-210ENST00000557431 SLC35C2Q9NQQ7 365 aa12.66□□□□□ -0.38
SLIRP-210ENST00000557431 DMGDHQ9UI17 866 aaKnown RBP12.66□□□□□ -0.38
SLIRP-210ENST00000557431 MRPS18CQ9Y3D5 142 aaKnown RBP12.66□□□□□ -0.38
SLIRP-210ENST00000557431 HEATR1Q9H583 2144 aaKnown RBP12.65□□□□□ -0.38
SLIRP-210ENST00000557431 EMC8O43402 210 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 FADS1O60427 444 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 SUPT7LO94864 414 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 CRHP06850 196 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 TBXA2RP21731 343 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 HMOX2P30519 316 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 TRA2BP62995 288 aaKnown RBP12.65□□□□□ -0.38
SLIRP-210ENST00000557431 KRTAP1-1Q07627 177 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 BCL2A1Q16548 175 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 TSNAXIP1Q2TAA8 658 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 TMEM107Q6UX40 140 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 WFDC8Q8IUA0 241 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 DUSP19Q8WTR2 217 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 SLC9A6Q92581 669 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 BBS4Q96RK4 519 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 KLHDC3Q9BQ90 382 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 MRPL57Q9BQC6 102 aaKnown RBP12.65□□□□□ -0.38
SLIRP-210ENST00000557431 REPIN1Q9BWE0 567 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms