RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 SIRT6Q8N6T7 355 aa10.68□□□□□ -0.7
SRP54-213ENST00000556994 POGLUT1Q8NBL1 392 aa10.68□□□□□ -0.7
SRP54-213ENST00000556994 BBS10Q8TAM1 723 aa10.68□□□□□ -0.7
SRP54-213ENST00000556994 CLIP3Q96DZ5 547 aa10.68□□□□□ -0.7
SRP54-213ENST00000556994 MED30Q96HR3 178 aa10.68□□□□□ -0.7
SRP54-213ENST00000556994 MKRN2Q9H000 416 aaKnown RBP10.68□□□□□ -0.7
SRP54-213ENST00000556994 PPIL3Q9H2H8 161 aaKnown RBP10.68□□□□□ -0.7
SRP54-213ENST00000556994 MED20Q9H944 212 aa10.68□□□□□ -0.7
SRP54-213ENST00000556994 ZDHHC4Q9NPG8 344 aa10.68□□□□□ -0.7
SRP54-213ENST00000556994 MAT2BQ9NZL9 334 aa10.68□□□□□ -0.7
SRP54-213ENST00000556994 COL4A6Q14031 1691 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 SGK494L7N484 410 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 TRIM3O75382 744 aaPredicted RBP10.67□□□□□ -0.7
SRP54-213ENST00000556994 HOXB3P14651 431 aaPredicted RBP10.67□□□□□ -0.7
SRP54-213ENST00000556994 SHC1P29353 583 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 AHRP35869 848 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 OMPP47874 163 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 KHKP50053 298 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 STXBP1P61764 594 aaKnown RBP10.67□□□□□ -0.7
SRP54-213ENST00000556994 RNASE12Q5GAN4 147 aaKnown RBP10.67□□□□□ -0.7
SRP54-213ENST00000556994 FAM46CQ5VWP2 391 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 RASSF6Q6ZTQ3 369 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 CREB3L2Q70SY1 520 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 KRT74Q7RTS7 529 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 MRGPREQ86SM8 312 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 CPOQ8IVL8 374 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 DCUN1D3Q8IWE4 304 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 NRMQ8IXM6 262 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 NATD1Q8N6N6 113 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 DNAJA4Q8WW22 397 aaPredicted RBP10.67□□□□□ -0.7
SRP54-213ENST00000556994 ARRDC3Q96B67 414 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 THAP7Q9BT49 309 aaPredicted RBP10.67□□□□□ -0.7
SRP54-213ENST00000556994 SPATA5L1Q9BVQ7 753 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 XKR8Q9H6D3 395 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 IMP3Q9NV31 184 aaKnown RBP10.67□□□□□ -0.7
SRP54-213ENST00000556994 STMN3Q9NZ72 180 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 CBLCQ9ULV8 474 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 CHST2Q9Y4C5 530 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 IRAK3Q9Y616 596 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 C17orf113A0A1B0GUU1 675 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 LEUTXA8MZ59 168 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 C4orf51C9J302 202 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 EIF4EP06730 217 aaKnown RBP10.67□□□□□ -0.7
SRP54-213ENST00000556994 FUT1P19526 365 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 TBXA2RP21731 343 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 OR10A3P58181 314 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 TAS2R38P59533 333 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 ANKRD54Q6NXT1 300 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 ZNF322Q6U7Q0 402 aaPredicted RBP10.67□□□□□ -0.7
SRP54-213ENST00000556994 AMZ2Q86W34 360 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 SLC38A6Q8IZM9 456 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 GHDCQ8N2G8 530 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 C9orf62Q8N4C0 152 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 OR8K5Q8NH50 307 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 SUN3Q8TAQ9 357 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 TMEM255BQ8WV15 326 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 RFKQ969G6 155 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 MAP6Q96JE9 813 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 ZSWIM3Q96MP5 696 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 ABCG5Q9H222 651 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 POLMQ9NP87 494 aaPredicted RBP10.67□□□□□ -0.7
SRP54-213ENST00000556994 ZNF222Q9UK12 451 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 SLC13A4Q9UKG4 626 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 CLEC4AQ9UMR7 237 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 NCKAP1Q9Y2A7 1128 aa10.67□□□□□ -0.7
SRP54-213ENST00000556994 A0A0A6YYD5 115 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 A0A1W2PPV9 198 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 MAN2B1O00754 1011 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 EEF1E1O43324 174 aaKnown RBP10.66□□□□□ -0.7
SRP54-213ENST00000556994 FCMRO60667 390 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 CXCL14O95715 111 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 THY1P04216 161 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 SYPP08247 313 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 IFNA8P32881 189 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 RNF144AP50876 292 aaPredicted RBP10.66□□□□□ -0.7
SRP54-213ENST00000556994 NTHL1P78549 312 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 TRAM2Q15035 370 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 TCEAL5Q5H9L2 206 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 C9orf64Q5T6V5 341 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 SMARCD3Q6STE5 483 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 ZNF767PQ75MW2 155 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 C12orf40Q86WS4 652 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 GPR135Q8IZ08 494 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 SAMD12Q8N8I0 201 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 LINC01555Q8NAE3 123 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 PIGXQ8TBF5 258 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 DIO2Q92813 273 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 CNRIP1Q96F85 164 aaPredicted RBP10.66□□□□□ -0.7
SRP54-213ENST00000556994 LINC00615Q96LM1 132 aaPredicted RBP10.66□□□□□ -0.7
SRP54-213ENST00000556994 LGR4Q9BXB1 951 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 PINK1Q9BXM7 581 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 PELI2Q9HAT8 420 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 BCL2L10Q9HD36 194 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 HINT3Q9NQE9 182 aaKnown RBP10.66□□□□□ -0.7
SRP54-213ENST00000556994 PAK6Q9NQU5 681 aaPredicted RBP10.66□□□□□ -0.7
SRP54-213ENST00000556994 H2AFY2Q9P0M6 372 aaPredicted RBP10.66□□□□□ -0.7
SRP54-213ENST00000556994 TNFRSF10DQ9UBN6 386 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 ATG4BQ9Y4P1 393 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 CHD7Q9P2D1 2997 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 A0A0G2JPF8 293 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms