RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 PRAMEF25A6NGN4 478 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 FAM166BA8MTA8 275 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 ABCB7O75027 752 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 ICOSLGO75144 302 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 WISP2O76076 250 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 KCNK2O95069 426 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 IL33O95760 270 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 CRYABP02511 175 aaKnown RBP16.03■□□□□ 0.16
SHMT2-225ENST00000556798 KRT16P08779 473 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 ZNF24P17028 368 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 CASP3P42574 277 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 RPP38P78345 283 aaKnown RBP16.03■□□□□ 0.16
SHMT2-225ENST00000556798 POU6F2P78424 691 aaPredicted RBP16.03■□□□□ 0.16
SHMT2-225ENST00000556798 ALDH6A1Q02252 535 aaKnown RBP16.03■□□□□ 0.16
SHMT2-225ENST00000556798 PLGLB1Q02325 96 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 EFR3AQ14156 821 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 PAGE3Q5JUK9 113 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 TNFAIP8L2Q6P589 184 aaPredicted RBP16.03■□□□□ 0.16
SHMT2-225ENST00000556798 ZAR1Q86SH2 424 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 RNF130Q86XS8 419 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 NR4A3Q92570 626 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 TMCO6Q96DC7 493 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 NEURL3Q96EH8 262 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 JSRP1Q96MG2 331 aaPredicted RBP16.03■□□□□ 0.16
SHMT2-225ENST00000556798 SECISBP2Q96T21 854 aaKnown RBP16.03■□□□□ 0.16
SHMT2-225ENST00000556798 BARD1Q99728 777 aaKnown RBP16.03■□□□□ 0.16
SHMT2-225ENST00000556798 BTBD2Q9BX70 525 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 TTTY12Q9BZ98 90 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 SAR1AQ9NR31 198 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 DUSP22Q9NRW4 184 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 TMEM45AQ9NWC5 275 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 FBXO34Q9NWN3 711 aa16.03■□□□□ 0.16
SHMT2-225ENST00000556798 MRTO4Q9UKD2 239 aaKnown RBP16.03■□□□□ 0.16
SHMT2-225ENST00000556798 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.03■□□□□ 0.16
SHMT2-225ENST00000556798 RP1L1Q8IWN7 2480 aaPredicted RBP16.03■□□□□ 0.16
SHMT2-225ENST00000556798 DNAJC13O75165 2243 aa16.02■□□□□ 0.16
SHMT2-225ENST00000556798 C2orf72A6NCS6 295 aa16.02■□□□□ 0.16
SHMT2-225ENST00000556798 PLA2G2AP14555 144 aa16.02■□□□□ 0.16
SHMT2-225ENST00000556798 PTPN6P29350 595 aa16.02■□□□□ 0.16
SHMT2-225ENST00000556798 PTGDSP41222 190 aa16.02■□□□□ 0.16
SHMT2-225ENST00000556798 ZNF324BQ6AW86 544 aaPredicted RBP16.02■□□□□ 0.16
SHMT2-225ENST00000556798 CPLX4Q7Z7G2 160 aa16.02■□□□□ 0.16
SHMT2-225ENST00000556798 DNAJB8Q8NHS0 232 aa16.02■□□□□ 0.16
SHMT2-225ENST00000556798 RAB8BQ92930 207 aa16.02■□□□□ 0.16
SHMT2-225ENST00000556798 AURKBQ96GD4 344 aaPredicted RBP16.02■□□□□ 0.16
SHMT2-225ENST00000556798 SLX1AQ9BQ83 275 aa16.02■□□□□ 0.16
SHMT2-225ENST00000556798 OSBPL11Q9BXB4 747 aa16.02■□□□□ 0.16
SHMT2-225ENST00000556798 ANGPTL4Q9BY76 406 aa16.02■□□□□ 0.16
SHMT2-225ENST00000556798 NMUR2Q9GZQ4 415 aa16.02■□□□□ 0.16
SHMT2-225ENST00000556798 PAIP1Q9H074 479 aaKnown RBP16.02■□□□□ 0.16
SHMT2-225ENST00000556798 GIN1Q9NXP7 522 aa16.02■□□□□ 0.16
SHMT2-225ENST00000556798 SLAMF8Q9P0V8 285 aa16.02■□□□□ 0.16
SHMT2-225ENST00000556798 HRH3Q9Y5N1 445 aa16.02■□□□□ 0.16
SHMT2-225ENST00000556798 A0A1W2PP18 115 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 ANKRD33BA6NCL7 494 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 LRRC3CA6NJW4 275 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 C17orf51A8MQB3 221 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 NPIPA5E9PKD4 350 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 TFECO14948 347 aaPredicted RBP16.01■□□□□ 0.15
SHMT2-225ENST00000556798 HS6ST1O60243 411 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 OR12D1P0DN82 309 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 EVI2BP34910 448 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 MASP1P48740 699 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 TRPC1P48995 793 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 KHKP50053 298 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 TDGF1P3P51864 188 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 PSMD4P55036 377 aaKnown RBP16.01■□□□□ 0.15
SHMT2-225ENST00000556798 FOXK1P85037 733 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 FOXO1Q12778 655 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 KLF10Q13118 480 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 GRAMD1BQ3KR37 738 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 TBCELQ5QJ74 424 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 COX20Q5RI15 118 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 DCST2Q5T1A1 773 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 OLIG3Q7RTU3 272 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 SIAH3Q8IW03 269 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 POGLUT1Q8NBL1 392 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 FAM110BQ8TC76 370 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 MIPOL1Q8TD10 442 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 ZFP90Q8TF47 636 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 ZNF597Q96LX8 424 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 ARMCX1Q9P291 453 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 BOKQ9UMX3 212 aaPredicted RBP16.01■□□□□ 0.15
SHMT2-225ENST00000556798 NPIPA1Q9UND3 350 aa16.01■□□□□ 0.15
SHMT2-225ENST00000556798 GTF3C1Q12789 2109 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 A0A096LPI6 279 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 NPIPA5A0A0B4J1W7 369 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 NPIPA7E9PJI5 369 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 ACOT7O00154 380 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 GNB5O14775 395 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 ANGPT2O15123 496 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 SCO2O43819 266 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 SNX3O60493 162 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 TRIM3O75382 744 aaPredicted RBP16■□□□□ 0.15
SHMT2-225ENST00000556798 GLSO94925 669 aaPredicted RBP16■□□□□ 0.15
SHMT2-225ENST00000556798 UTS2O95399 124 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 ZCCHC18P0CG32 403 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 NPIPA8P0DM63 369 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 HOXB9P17482 250 aaPredicted RBP16■□□□□ 0.15
SHMT2-225ENST00000556798 PPIAP62937 165 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms