RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 NOXRED1Q6NXP6 359 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 GRAMD2AQ8IUY3 354 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 GCNT2Q8N0V5 402 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 CHDHQ8NE62 594 aaPredicted RBP20.47■□□□□ 0.87
ACTN1-220ENST00000556433 ACBD3Q9H3P7 528 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 GLIPR2Q9H4G4 154 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 SDHAF3Q9NRP4 125 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 DDX18Q9NVP1 670 aaKnown RBP20.47■□□□□ 0.87
ACTN1-220ENST00000556433 ITPR3Q14573 2671 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 UPK1AO00322 258 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 PLIN3O60664 434 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 RSL1D1O76021 490 aaKnown RBP20.46■□□□□ 0.87
ACTN1-220ENST00000556433 SHBGP04278 402 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 CPA2P48052 419 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 B3GALT5-AS1P59052 145 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 EEF1A1P68104 462 aaKnown RBP20.46■□□□□ 0.87
ACTN1-220ENST00000556433 BCL2A1Q16548 175 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 DECR1Q16698 335 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 EEF1A1P5Q5VTE0 462 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 CHMP1BQ7LBR1 199 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 CCDC63Q8NA47 563 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 ELP4Q96EB1 424 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 AMDHD1Q96NU7 426 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 YIPF4Q9BSR8 244 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 TMUB1Q9BVT8 246 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 PIGMQ9H3S5 423 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 TNFRSF12AQ9NP84 129 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 GALNT8Q9NY28 637 aa20.46■□□□□ 0.87
ACTN1-220ENST00000556433 SETD2Q9BYW2 2564 aaPredicted RBP20.46■□□□□ 0.87
ACTN1-220ENST00000556433 FADS1O60427 444 aa20.45■□□□□ 0.86
ACTN1-220ENST00000556433 SEC22BO75396 215 aa20.45■□□□□ 0.86
ACTN1-220ENST00000556433 TGM6O95932 706 aa20.45■□□□□ 0.86
ACTN1-220ENST00000556433 UROSP10746 265 aa20.45■□□□□ 0.86
ACTN1-220ENST00000556433 CPA3P15088 417 aa20.45■□□□□ 0.86
ACTN1-220ENST00000556433 CRHR1P34998 444 aa20.45■□□□□ 0.86
ACTN1-220ENST00000556433 IKBIPQ70UQ0 350 aa20.45■□□□□ 0.86
ACTN1-220ENST00000556433 P4HA3Q7Z4N8 544 aa20.45■□□□□ 0.86
ACTN1-220ENST00000556433 TGIF2LYQ8IUE0 185 aa20.45■□□□□ 0.86
ACTN1-220ENST00000556433 OR2L13Q8N349 312 aa20.45■□□□□ 0.86
ACTN1-220ENST00000556433 FADS6Q8N9I5 356 aa20.45■□□□□ 0.86
ACTN1-220ENST00000556433 OR2M3Q8NG83 312 aa20.45■□□□□ 0.86
ACTN1-220ENST00000556433 UBLCP1Q8WVY7 318 aaPredicted RBP20.45■□□□□ 0.86
ACTN1-220ENST00000556433 C12orf65Q9H3J6 166 aaKnown RBP20.45■□□□□ 0.86
ACTN1-220ENST00000556433 Q9N2J8 555 aa20.45■□□□□ 0.86
ACTN1-220ENST00000556433 OXSMQ9NWU1 459 aa20.45■□□□□ 0.86
ACTN1-220ENST00000556433 FLRT3Q9NZU0 649 aa20.45■□□□□ 0.86
ACTN1-220ENST00000556433 MED11Q9P086 117 aa20.45■□□□□ 0.86
ACTN1-220ENST00000556433 MRTO4Q9UKD2 239 aaKnown RBP20.45■□□□□ 0.86
ACTN1-220ENST00000556433 SMIM23A6NLE4 172 aa20.44■□□□□ 0.86
ACTN1-220ENST00000556433 PEPDP12955 493 aa20.44■□□□□ 0.86
ACTN1-220ENST00000556433 HK1P19367 917 aa20.44■□□□□ 0.86
ACTN1-220ENST00000556433 DIO3P55073 304 aa20.44■□□□□ 0.86
ACTN1-220ENST00000556433 STX5Q13190 355 aa20.44■□□□□ 0.86
ACTN1-220ENST00000556433 ZNHIT3Q15649 155 aaPredicted RBP20.44■□□□□ 0.86
ACTN1-220ENST00000556433 UBQLNLQ8IYU4 475 aa20.44■□□□□ 0.86
ACTN1-220ENST00000556433 EGLN2Q96KS0 407 aa20.44■□□□□ 0.86
ACTN1-220ENST00000556433 DACH2Q96NX9 599 aa20.44■□□□□ 0.86
ACTN1-220ENST00000556433 ABCG2Q9UNQ0 655 aa20.44■□□□□ 0.86
ACTN1-220ENST00000556433 CCL27Q9Y4X3 112 aa20.44■□□□□ 0.86
ACTN1-220ENST00000556433 A8MXE2 369 aa20.43■□□□□ 0.86
ACTN1-220ENST00000556433 COPEO14579 308 aa20.43■□□□□ 0.86
ACTN1-220ENST00000556433 HCRTR2O43614 444 aa20.43■□□□□ 0.86
ACTN1-220ENST00000556433 PSMG1O95456 288 aa20.43■□□□□ 0.86
ACTN1-220ENST00000556433 RFX3P48380 749 aa20.43■□□□□ 0.86
ACTN1-220ENST00000556433 CLK3P49761 638 aaKnown RBP20.43■□□□□ 0.86
ACTN1-220ENST00000556433 PPP2R2AP63151 447 aa20.43■□□□□ 0.86
ACTN1-220ENST00000556433 KIAA0040Q15053 153 aa20.43■□□□□ 0.86
ACTN1-220ENST00000556433 RAET1LQ5VY80 246 aa20.43■□□□□ 0.86
ACTN1-220ENST00000556433 CLEC6AQ6EIG7 209 aa20.43■□□□□ 0.86
ACTN1-220ENST00000556433 PAMR1Q6UXH9 720 aa20.43■□□□□ 0.86
ACTN1-220ENST00000556433 MEIOBQ8N635 442 aa20.43■□□□□ 0.86
ACTN1-220ENST00000556433 DUSP19Q8WTR2 217 aa20.43■□□□□ 0.86
ACTN1-220ENST00000556433 GFM2Q969S9 779 aaKnown RBP20.43■□□□□ 0.86
ACTN1-220ENST00000556433 METTL2AQ96IZ6 378 aaKnown RBP20.43■□□□□ 0.86
ACTN1-220ENST00000556433 LMF2Q9BU23 707 aaKnown RBP20.43■□□□□ 0.86
ACTN1-220ENST00000556433 RTN4RQ9BZR6 473 aa20.43■□□□□ 0.86
ACTN1-220ENST00000556433 PACSIN3Q9UKS6 424 aa20.43■□□□□ 0.86
ACTN1-220ENST00000556433 MED12LQ86YW9 2145 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 A0A1W2PNV4 684 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 SLC28A1O00337 649 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 TNFSF13O75888 250 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 IL33O95760 270 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 GABRA3P34903 492 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 PSMD4P55036 377 aaKnown RBP20.42■□□□□ 0.86
ACTN1-220ENST00000556433 LIPMQ5VYY2 423 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 ZNF551Q7Z340 670 aaPredicted RBP20.42■□□□□ 0.86
ACTN1-220ENST00000556433 CAMKMTQ7Z624 323 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 MARCH3Q86UD3 253 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 TDRPQ86YL5 185 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 EIF1ADQ8N9N8 165 aaKnown RBP20.42■□□□□ 0.86
ACTN1-220ENST00000556433 LRRN4CLQ8ND94 238 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 OR5M1Q8NGP8 315 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 MBD6Q96DN6 1003 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 PTGES2Q9H7Z7 377 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 PPCSQ9HAB8 311 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 C3orf14Q9HBI5 128 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 LRTM1Q9HBL6 345 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 C1orf109Q9NX04 203 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 FAM120CQ9NX05 1096 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms