RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	SFRP4	Q6FHJ7	346 aa	Predicted RBP	11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	YIPF7	Q8N8F6	280 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	WDR20	Q8TBZ3	569 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	SLC5A11	Q8WWX8	675 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	PITX2	Q99697	317 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	KCNK12	Q9HB15	430 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	IL21	Q9HBE4	155 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	NDUFAF4	Q9P032	175 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	SH2B3	Q9UQQ2	575 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	PADI2	Q9Y2J8	665 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	ALG5	Q9Y673	324 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	C12orf71	A8MTZ7	269 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	ZNF878	C9JN71	531 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	ZNF821	O75541	412 aa	Predicted RBP	11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	ETHE1	O95571	254 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	ZNF763	Q0D2J5	394 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	PON3	Q15166	354 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	SHH	Q15465	462 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	MICA	Q29983	383 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	ZNF181	Q2M3W8	571 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	COX20	Q5RI15	118 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	TUBA3E	Q6PEY2	450 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	APH1B	Q8WW43	257 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	MSLNL	Q96KJ4	702 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	BRF2	Q9HAW0	419 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	RLIM	Q9NVW2	624 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	P2RX2	Q9UBL9	471 aa		11.62	□□□□□ -0.55
TMPO-212	ENST00000556029	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	11.62	□□□□□ -0.55
TMPO-212	ENST00000556029		M0R233	179 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	CDC40	O60508	579 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	PBX2	P40425	430 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	SLC19A1	P41440	591 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	PSMA6	P60900	246 aa	Known RBP	11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	C9orf50	Q5SZB4	431 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	OXR1	Q8N573	874 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	LYAR	Q9NX58	379 aa	Known RBP	11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	CEP350	Q5VT06	3117 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	KANTR	A0A1W2PQU2	76 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	OR52A4P	A6NMU1	304 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029		H0YIV9	168 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	OR7A10	O76100	309 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	STOM	P27105	288 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	EIF2D	P41214	584 aa	Known RBP	11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	CCR8	P51685	355 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	HBA1	P69905	142 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	ADAM15	Q13444	863 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	HNRNPA1L2	Q32P51	320 aa	Known RBP	11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	ZNF761	Q86XN6	746 aa	Predicted RBP	11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	PCNP	Q8WW12	178 aa	Known RBP	11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	NEIL2	Q969S2	332 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	TSACC	Q96A04	125 aa	Predicted RBP	11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	CIDEC	Q96AQ7	238 aa	Predicted RBP	11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	NIPSNAP1	Q9BPW8	284 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	TAPBPL	Q9BX59	468 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	GABARAPL3	Q9BY60	117 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	CPEB1	Q9BZB8	566 aa	Known RBP	11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	C14orf105	Q9NVL8	296 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	IGLV3-16	A0A075B6K0	115 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029		J3KTA2	159 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	CAPN5	O15484	640 aa	Predicted RBP	11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	HOXB9	P17482	250 aa	Predicted RBP	11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	CLDN2	P57739	230 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	GPNMB	Q14956	572 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	SPHAR	Q15513	63 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	SOWAHC	Q53LP3	525 aa	Predicted RBP	11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	ZNF852	Q6ZMS4	543 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	QSOX2	Q6ZRP7	698 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	GALNT6	Q8NCL4	622 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	OR5AR1	Q8NGP9	310 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	11.61	□□□□□ -0.55	4e-9	■■□□□ 12.2
TMPO-212	ENST00000556029	SMPDL3A	Q92484	453 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	NDC1	Q9BTX1	674 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	TPSD1	Q9BZJ3	242 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	CPNE5	Q9HCH3	593 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	MKKS	Q9NPJ1	570 aa	Predicted RBP	11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	PNO1	Q9NRX1	252 aa	Known RBP	11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	NLGN3	Q9NZ94	848 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	ANKMY1	Q9P2S6	941 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	CYP8B1	Q9UNU6	501 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	HS3ST2	Q9Y278	367 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	WDR45	Q9Y484	360 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	PIAS3	Q9Y6X2	628 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	PIKFYVE	Q9Y2I7	2098 aa		11.61	□□□□□ -0.55
TMPO-212	ENST00000556029	METTL15	A6NJ78	407 aa		11.6	□□□□□ -0.55
TMPO-212	ENST00000556029	RNASET2	O00584	256 aa	Known RBP	11.6	□□□□□ -0.55
TMPO-212	ENST00000556029	SSX5	O60225	188 aa		11.6	□□□□□ -0.55
TMPO-212	ENST00000556029	DNASE1	P24855	282 aa		11.6	□□□□□ -0.55
TMPO-212	ENST00000556029	ZNF45	Q02386	682 aa		11.6	□□□□□ -0.55
TMPO-212	ENST00000556029	NRSN1	Q8IZ57	195 aa		11.6	□□□□□ -0.55
TMPO-212	ENST00000556029	TSTD1	Q8NFU3	115 aa		11.6	□□□□□ -0.55
TMPO-212	ENST00000556029	F2RL3	Q96RI0	385 aa		11.6	□□□□□ -0.55
TMPO-212	ENST00000556029	CD180	Q99467	661 aa		11.6	□□□□□ -0.55
TMPO-212	ENST00000556029	MCHR1	Q99705	422 aa		11.6	□□□□□ -0.55
TMPO-212	ENST00000556029	MACROD1	Q9BQ69	325 aa		11.6	□□□□□ -0.55
TMPO-212	ENST00000556029	PPIL3	Q9H2H8	161 aa	Known RBP	11.6	□□□□□ -0.55
TMPO-212	ENST00000556029	RNF167	Q9H6Y7	350 aa		11.6	□□□□□ -0.55
TMPO-212	ENST00000556029	CALML5	Q9NZT1	146 aa		11.6	□□□□□ -0.55
TMPO-212	ENST00000556029	NUFIP1	Q9UHK0	495 aa	Known RBP	11.6	□□□□□ -0.55
TMPO-212	ENST00000556029	TMPRSS11E	Q9UL52	423 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms