RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 FASLGP48023 281 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 PPM1FP49593 454 aaPredicted RBP6.38□□□□□ -1.39
SLIRP-204ENST00000555890 AFF3P51826 1226 aaKnown RBP6.38□□□□□ -1.39
SLIRP-204ENST00000555890 NCBP2P52298 156 aaKnown RBP eCLIP6.38□□□□□ -1.397e-14■■■□□ 15.3
SLIRP-204ENST00000555890 CHN2P52757 468 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 MVDP53602 400 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 ARF3P61204 181 aaPredicted RBP6.38□□□□□ -1.39
SLIRP-204ENST00000555890 SKP1P63208 163 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 SELENOWP63302 87 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 EPS8Q12929 822 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 SCARB2Q14108 478 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 DAG1Q14118 895 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 GNA13Q14344 377 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 ADRM1Q16186 407 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 CYBRD1Q53TN4 286 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 C6orf52Q5T4I8 152 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 REEP3Q6NUK4 255 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 NIPAL1Q6NVV3 410 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 SLC48A1Q6P1K1 146 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 TMEM154Q6P9G4 183 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 OGFOD3Q6PK18 319 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 SEZ6L2Q6UXD5 910 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 TMEM64Q6YI46 380 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 CCDC80Q76M96 950 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 STK32CQ86UX6 486 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 HIPK1Q86Z02 1210 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 APLFQ8IW19 511 aaPredicted RBP6.38□□□□□ -1.39
SLIRP-204ENST00000555890 ST13P4Q8IZP2 240 aaPredicted RBP6.38□□□□□ -1.39
SLIRP-204ENST00000555890 DHRSXQ8N5I4 330 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 RCBTB1Q8NDN9 531 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 OR5AK3PQ8NH89 298 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 OR5K1Q8NHB7 308 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 NFKBIDQ8NI38 313 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 PSMA8Q8TAA3 256 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 SFXN5Q8TD22 340 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 MAGEE2Q8TD90 523 aaPredicted RBP6.38□□□□□ -1.39
SLIRP-204ENST00000555890 TMBIM1Q969X1 311 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 SMIM10Q96HG1 83 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 TPD52L3Q96J77 140 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 CNBD2Q96M20 576 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 AMDHD1Q96NU7 426 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 DOHHQ9BU89 302 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 DUSP23Q9BVJ7 150 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 NPLQ9BXD5 320 aaPredicted RBP6.38□□□□□ -1.39
SLIRP-204ENST00000555890 AICDAQ9GZX7 198 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 EPS8L2Q9H6S3 715 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 LYRM4Q9HD34 91 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 SMPD3Q9NY59 655 aaPredicted RBP6.38□□□□□ -1.39
SLIRP-204ENST00000555890 IFT80Q9P2H3 777 aaPredicted RBP6.38□□□□□ -1.39
SLIRP-204ENST00000555890 PDP2Q9P2J9 529 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 POMT2Q9UKY4 750 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 ATG4BQ9Y4P1 393 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 PCDHGA1Q9Y5H4 931 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 SNX11Q9Y5W9 270 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 LOC105369274A0A096LPK9 316 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 LOC102723532A0A0G2JNH3 316 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 GLOD5A6NK44 160 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 RHPN2P1A8MT19 583 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 C4orf51C9J302 202 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 M0QX08 132 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 PDLIM1O00151 329 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 EI24O14681 340 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 PGRMC2O15173 223 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 EMC8O43402 210 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 SRPX2O60687 465 aaPredicted RBP6.37□□□□□ -1.39
SLIRP-204ENST00000555890 PIAS2O75928 621 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 PDE9AO76083 593 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 IL33O95760 270 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 CER1O95813 267 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 CBX7O95931 251 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 C1QCP02747 245 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 PVRP15151 417 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 GNSP15586 552 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 ITGA2P17301 1181 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 GNLYP22749 145 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 PPP2R1BP30154 601 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 MAGEA2P43356 314 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 CSNK1EP49674 416 aaKnown RBP6.37□□□□□ -1.39
SLIRP-204ENST00000555890 KHKP50053 298 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 CDK9P50750 372 aaKnown RBP6.37□□□□□ -1.39
SLIRP-204ENST00000555890 ALDH3A2P51648 485 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 MAZP56270 477 aaKnown RBP6.37□□□□□ -1.39
SLIRP-204ENST00000555890 VSX2P58304 361 aaPredicted RBP6.37□□□□□ -1.39
SLIRP-204ENST00000555890 PRR5P85299 388 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 TNFRSF17Q02223 184 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 MERTKQ12866 999 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 CDK5R2Q13319 367 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 TP53BP2Q13625 1128 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 C16orf72Q14CZ0 275 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 NDUFA9Q16795 377 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 DEFB134Q4QY38 66 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 C14orf28Q4W4Y0 310 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 IFI44LQ53G44 452 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 CRB2Q5IJ48 1285 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 LCE3BQ5TA77 95 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 C18orf63Q68DL7 685 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 OR2T5Q6IEZ7 315 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 OR52E8Q6IFG1 317 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 KRT80Q6KB66 452 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 UGT2A3Q6UWM9 527 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms