RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 CCL1P22362 96 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 C21orf33P30042 268 aaPredicted RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 FMO3P31513 532 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 DCTDP32321 178 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 GIPRP48546 466 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CCR5P51681 352 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 HIST1H3AP68431 136 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 E2F1Q01094 437 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 FABP5Q01469 135 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ST3GAL4Q11206 333 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 EFR3AQ14156 821 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CRMP1Q14194 572 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 PLCL1Q15111 1095 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 DHCR24Q15392 516 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 HIST3H3Q16695 136 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 HIST2H3PS2Q5TEC6 136 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 YOD1Q5VVQ6 348 aaPredicted RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 IL31Q6EBC2 164 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 DESI1Q6ICB0 168 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ASPHD2Q6ICH7 369 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 MFSD12Q6NUT3 480 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 HIST2H3AQ71DI3 136 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 TMPRSS9Q7Z410 1059 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 SLC22A16Q86VW1 577 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 KRT73Q86Y46 540 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 TMEM25Q86YD3 366 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 KLBQ86Z14 1044 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 SDR16C5Q8N3Y7 309 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 OR51Q1Q8NH59 317 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 OR14A16Q8NHC5 309 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 SUSD6Q92537 303 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CDS1Q92903 461 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 UBE2FQ969M7 185 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 FAM162AQ96A26 154 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 NUS1Q96E22 293 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 TMEM19Q96HH6 336 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 TREX2Q9BQ50 279 aaPredicted RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 PLA2G12AQ9BZM1 189 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ZCCHC2Q9C0B9 1178 aaKnown RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ROGDIQ9GZN7 287 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 TPK1Q9H3S4 243 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 DZANK1Q9NVP4 752 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 MS4A12Q9NXJ0 267 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 VSX1Q9NZR4 365 aaPredicted RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 P2RX2Q9UBL9 471 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 LSM7Q9UK45 103 aaKnown RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 SNX7Q9UNH6 387 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 SIGLEC7Q9Y286 467 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 HEBP2Q9Y5Z4 205 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 REV3LO60673 3130 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 PHF3Q92576 2039 aaKnown RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ACOD1A6NK06 481 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 DBX1A6NMT0 343 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 NT5C1B-RDH14C9J2C7 533 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 EMC8O43402 210 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 RFPL3O75679 317 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 FGF18O76093 207 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 C6orf47O95873 294 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CATP04040 527 aaKnown RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 FHP07954 510 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 TYRP14679 529 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 PDHA2P29803 388 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CNR2P34972 360 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 TRHRP34981 398 aaPredicted RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 TGFBR1P36897 503 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 PEX19P40855 299 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 BCL6P41182 706 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 SLC1A3P43003 542 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 BDKRB1P46663 353 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 RORCP51449 518 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ROM1Q03395 351 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 RPE65Q16518 533 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 PGGHGQ32M88 737 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ARMCX4Q5H9R4 360 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF311Q5JNZ3 666 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 PRAMEF14Q5SWL7 426 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 PRAMEF13Q5VWM6 474 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 PTRHD1Q6GMV3 140 aaKnown RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ACSM5Q6NUN0 579 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 TMEM53Q6P2H8 277 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 OGFOD3Q6PK18 319 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 KIAA1324Q6UXG2 1013 aaKnown RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 OVCH2Q7RTZ1 564 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 LRRC28Q86X40 367 aaPredicted RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 AMER2Q8N7J2 671 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF615Q8N8J6 731 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 NFKBIDQ8NI38 313 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 GPR148Q8TDV2 347 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 UTP15Q8TED0 518 aaKnown RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 NXPE3Q969Y0 559 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CIDECQ96AQ7 238 aaPredicted RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 SERINC2Q96SA4 455 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 DCLRE1CQ96SD1 692 aaKnown RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 BEGAINQ9BUH8 593 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 NDEL1Q9GZM8 345 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 SGK2Q9HBY8 427 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 BPIFA1Q9NP55 256 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 TDP1Q9NUW8 608 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 TRNAU1APQ9NX07 287 aaKnown RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 GPR83Q9NYM4 423 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms