RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 SMYD2Q9NRG4 433 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 CHMP2BQ9UQN3 213 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 SYNGR4O95473 234 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 GBAP04062 536 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 CSF3P09919 207 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 IGHV4-31P0DP07 118 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 STMN1P16949 149 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 CFPP27918 469 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 FEN1P39748 380 aaKnown RBP13.64□□□□□ -0.23
CACNB3-220ENST00000551716 EIF1AXP47813 144 aaKnown RBP13.64□□□□□ -0.23
CACNB3-220ENST00000551716 FNTAP49354 379 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 CLK3P49761 638 aaKnown RBP13.64□□□□□ -0.23
CACNB3-220ENST00000551716 LSM11P83369 360 aaKnown RBP eCLIP13.64□□□□□ -0.23
CACNB3-220ENST00000551716 BSPH1Q075Z2 132 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 TAB1Q15750 504 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 HP1BP3Q5SSJ5 553 aaPredicted RBP13.64□□□□□ -0.23
CACNB3-220ENST00000551716 CCNYL2Q5T2Q4 361 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 SLC48A1Q6P1K1 146 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 FIGNL1Q6PIW4 674 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 TEX9Q8N6V9 391 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 SGMS2Q8NHU3 365 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 FAM168AQ92567 244 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 ZMYND19Q96E35 227 aaPredicted RBP13.64□□□□□ -0.23
CACNB3-220ENST00000551716 UBXN10Q96LJ8 280 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 MOCS1Q9NZB8 636 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 XPR1Q9UBH6 696 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 ASIC3Q9UHC3 531 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 CES1P1Q9UKY3 287 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 CLEC4AQ9UMR7 237 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 PCDHA9Q9Y5H5 950 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 TEX264Q9Y6I9 313 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 ZNF780BQ9Y6R6 833 aa13.64□□□□□ -0.23
CACNB3-220ENST00000551716 EXPH5Q8NEV8 1989 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 TCF21O43680 179 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 KLK1P06870 262 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 TUBBP07437 444 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 PABPC4LP0CB38 370 aaKnown RBP13.63□□□□□ -0.23
CACNB3-220ENST00000551716 CT45A8P0DMV1 189 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 CT45A9P0DMV2 189 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 IGFBP5P24593 272 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 SLC6A8P48029 635 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 P2RY6Q15077 328 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 CPSF6Q16630 551 aaKnown RBP eCLIP13.63□□□□□ -0.23
CACNB3-220ENST00000551716 TRMT12Q53H54 448 aaKnown RBP13.63□□□□□ -0.23
CACNB3-220ENST00000551716 CT45A2Q5DJT8 189 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 SFRP5Q5T4F7 317 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 WDR75Q8IWA0 830 aaKnown RBP13.63□□□□□ -0.23
CACNB3-220ENST00000551716 KBTBD8Q8NFY9 601 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 EXT2Q93063 718 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 PBKQ96KB5 322 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 MCMBPQ9BTE3 642 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 FOLH1BQ9HBA9 442 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 ZBTB26Q9HCK0 441 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 FBXO34Q9NWN3 711 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 MED11Q9P086 117 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 ABCG2Q9UNQ0 655 aa13.63□□□□□ -0.23
CACNB3-220ENST00000551716 EIF1AYO14602 144 aaKnown RBP13.62□□□□□ -0.23
CACNB3-220ENST00000551716 PHGDHO43175 533 aaKnown RBP13.62□□□□□ -0.23
CACNB3-220ENST00000551716 ERAL1O75616 437 aaKnown RBP13.62□□□□□ -0.23
CACNB3-220ENST00000551716 BMP4P12644 408 aa13.62□□□□□ -0.23
CACNB3-220ENST00000551716 ZNF16P17020 682 aaPredicted RBP13.62□□□□□ -0.23
CACNB3-220ENST00000551716 EVI2BP34910 448 aa13.62□□□□□ -0.23
CACNB3-220ENST00000551716 MAPK12P53778 367 aa13.62□□□□□ -0.23
CACNB3-220ENST00000551716 GPX6P59796 221 aa13.62□□□□□ -0.23
CACNB3-220ENST00000551716 MORF4L2Q15014 288 aa13.62□□□□□ -0.23
CACNB3-220ENST00000551716 ZNF662Q6ZS27 426 aa13.62□□□□□ -0.23
CACNB3-220ENST00000551716 GABRG1Q8N1C3 465 aa13.62□□□□□ -0.23
CACNB3-220ENST00000551716 OR5M1Q8NGP8 315 aa13.62□□□□□ -0.23
CACNB3-220ENST00000551716 UHMK1Q8TAS1 419 aaKnown RBP13.62□□□□□ -0.23
CACNB3-220ENST00000551716 KISS1RQ969F8 398 aaPredicted RBP13.62□□□□□ -0.23
CACNB3-220ENST00000551716 C1GALT1C1Q96EU7 318 aa13.62□□□□□ -0.23
CACNB3-220ENST00000551716 ADAM19Q9H013 955 aa13.62□□□□□ -0.23
CACNB3-220ENST00000551716 NMRAL1Q9HBL8 299 aa13.62□□□□□ -0.23
CACNB3-220ENST00000551716 HHATLQ9HCP6 504 aa13.62□□□□□ -0.23
CACNB3-220ENST00000551716 TXNDC16Q9P2K2 825 aa13.62□□□□□ -0.23
CACNB3-220ENST00000551716 MTO1Q9Y2Z2 717 aaKnown RBP13.62□□□□□ -0.23
CACNB3-220ENST00000551716 FREM1Q5H8C1 2179 aa13.62□□□□□ -0.23
CACNB3-220ENST00000551716 ALPK2Q86TB3 2170 aa13.62□□□□□ -0.23
CACNB3-220ENST00000551716 SVEP1Q4LDE5 3571 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 MEGF8Q7Z7M0 2845 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 GOLGA6L10A0A0M3HER8 536 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 LOC100289279A0A1B0GTE1 492 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 DPRXA6NFQ7 191 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 B4DXG7 233 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 SUPT3HB4E1H0 165 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 SCO2O43819 266 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 SUPT3HO75486 399 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 GCM2O75603 506 aaPredicted RBP13.61□□□□□ -0.23
CACNB3-220ENST00000551716 PCSK2P16519 638 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 IRX1P78414 480 aaPredicted RBP13.61□□□□□ -0.23
CACNB3-220ENST00000551716 ERCC6LQ2NKX8 1250 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 TMEM201Q5SNT2 666 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 PDSS1Q5T2R2 415 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 TBC1D1Q86TI0 1168 aaPredicted RBP13.61□□□□□ -0.23
CACNB3-220ENST00000551716 ISCA2Q86U28 154 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 GGNQ86UU5 652 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 CCDC25Q86WR0 208 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 OR10D3Q8NH80 312 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 WDR20Q8TBZ3 569 aa13.61□□□□□ -0.23
CACNB3-220ENST00000551716 ZNF675Q8TD23 568 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms