RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 CD22P20273 847 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 GPR18Q14330 331 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 WDR20Q8TBZ3 569 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 MSLNLQ96KJ4 702 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 NELL2Q99435 816 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 CDCA3Q99618 268 aaPredicted RBP14.11□□□□□ -0.15
CUX1-214ENST00000550008 RHNO1Q9BSD3 238 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 CHIAQ9BZP6 476 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 SPATA6Q9NWH7 488 aaPredicted RBP14.11□□□□□ -0.15
CUX1-214ENST00000550008 PLXNB2O15031 1838 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 A0A1B0GVC2 190 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 A6NIN4 97 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 C12orf71A8MTZ7 269 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 MT-ND5P03915 603 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 SSTR4P31391 388 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 EIF4EBP2Q13542 120 aaPredicted RBP14.11□□□□□ -0.15
CUX1-214ENST00000550008 NDUFA5Q16718 116 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 ZDHHC12Q96GR4 267 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 COMMD4Q9H0A8 199 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 C8orf33Q9H7E9 229 aaPredicted RBP14.11□□□□□ -0.15
CUX1-214ENST00000550008 SERGEFQ9UGK8 458 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 PPP1R3DO95685 299 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 OLFM2O95897 454 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 IGFBP1P08833 259 aaPredicted RBP14.11□□□□□ -0.15
CUX1-214ENST00000550008 BCL7AQ4VC05 210 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 PYCR3Q53H96 274 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 KLHL24Q6TFL4 600 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 ADAMTSL4Q6UY14 1074 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 SLC44A3Q8N4M1 653 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 SLC16A11Q8NCK7 471 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 OR6T1Q8NGN1 323 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 CITED4Q96RK1 184 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 MED28Q9H204 178 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 FKBP7Q9Y680 259 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 TRAPPC13A5PLN9 417 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 ITIH1P19827 911 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 SLC19A1P41440 591 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 APOFQ13790 326 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 KIR2DS3Q14952 304 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 LRIF1Q5T3J3 769 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 PLAG1Q6DJT9 500 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 CEACAM19Q7Z692 300 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 FAM160A2Q8N612 972 aaPredicted RBP14.11□□□□□ -0.15
CUX1-214ENST00000550008 TRUB1Q8WWH5 349 aaKnown RBP14.11□□□□□ -0.15
CUX1-214ENST00000550008 PPP1R14AQ96A00 147 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 SAP130Q9H0E3 1048 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 STOML2Q9UJZ1 356 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 TMEM5Q9Y2B1 443 aa14.11□□□□□ -0.15
CUX1-214ENST00000550008 EXOSC1Q9Y3B2 195 aaKnown RBP14.11□□□□□ -0.15
CUX1-214ENST00000550008 PRAMEF26H0Y7S4 382 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 TMX2-CTNND1H3BSU7 103 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 WWP2O00308 870 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 NPC1O15118 1278 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 SLITRK5O94991 958 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 OR1D4P47884 311 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 GIPRP48546 466 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 BCAP31P51572 246 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 ADARB1P78563 741 aaKnown RBP14.1□□□□□ -0.15
CUX1-214ENST00000550008 KIAA1211LQ6NV74 962 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 ZNF517Q6ZMY9 492 aaPredicted RBP14.1□□□□□ -0.15
CUX1-214ENST00000550008 RTL10Q7L3V2 364 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 OR2L8Q8NGY9 312 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 ZMYND19Q96E35 227 aaPredicted RBP14.1□□□□□ -0.15
CUX1-214ENST00000550008 COQ10AQ96MF6 247 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 SERINC2Q96SA4 455 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 ALKBH4Q9NXW9 302 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 GRHPRQ9UBQ7 328 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 TCRBV5S2A0A599 114 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 UBE2QL1A1L167 161 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 GFRA2O00451 464 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 GAPDHSO14556 408 aaPredicted RBP14.1□□□□□ -0.15
CUX1-214ENST00000550008 RNF13O43567 381 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 DBIP07108 87 aaKnown RBP14.1□□□□□ -0.15
CUX1-214ENST00000550008 ADORA3P0DMS8 318 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 GP1BBP13224 206 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 XCR1P46094 333 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 PPP2CBP62714 309 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 PPP2CAP67775 309 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 CTU2Q2VPK5 515 aaKnown RBP14.1□□□□□ -0.15
CUX1-214ENST00000550008 MCATQ8IVS2 390 aaKnown RBP14.1□□□□□ -0.15
CUX1-214ENST00000550008 OR13H1Q8NG92 308 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 OR52R1Q8NGF1 315 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 OR5T3Q8NGG3 340 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 AMDHD1Q96NU7 426 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 HDAC8Q9BY41 377 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 SMURF1Q9HCE7 757 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 CMAHPQ9Y471 501 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 TRAV27A0A087WT01 109 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 SMAD9O15198 467 aaKnown RBP14.1□□□□□ -0.15
CUX1-214ENST00000550008 PTHP01270 115 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 TMEM52BQ4KMG9 183 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 GPAT4Q86UL3 456 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 OR4F15Q8NGB8 312 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 SHDQ96IW2 340 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 PDCD10Q9BUL8 212 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 SLC22A4Q9H015 551 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 VNN3Q9NY84 501 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 EXTL2Q9UBQ6 330 aa14.1□□□□□ -0.15
CUX1-214ENST00000550008 PCDHGB7Q9Y5F8 929 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms