RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 ZAR1Q86SH2 424 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 GPALPP1Q8IXQ4 340 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 ZADH2Q8N4Q0 377 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 OR8J3Q8NGG0 315 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 FAM110BQ8TC76 370 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 DIO2Q92813 273 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 COL21A1Q96P44 957 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 TRIM45Q9H8W5 580 aaPredicted RBP19.5■□□□□ 0.71
VPS29-206ENST00000549578 OR6C70A6NIJ9 312 aa19.49■□□□□ 0.71
VPS29-206ENST00000549578 TNFRSF21O75509 655 aa19.49■□□□□ 0.71
VPS29-206ENST00000549578 IL33O95760 270 aa19.49■□□□□ 0.71
VPS29-206ENST00000549578 CALB2P22676 271 aa19.49■□□□□ 0.71
VPS29-206ENST00000549578 TNFSF10P50591 281 aa19.49■□□□□ 0.71
VPS29-206ENST00000549578 MXRA7P84157 204 aa19.49■□□□□ 0.71
VPS29-206ENST00000549578 LY6DQ14210 128 aa19.49■□□□□ 0.71
VPS29-206ENST00000549578 SYPL1Q16563 259 aa19.49■□□□□ 0.71
VPS29-206ENST00000549578 MDS2Q8NDY4 140 aa19.49■□□□□ 0.71
VPS29-206ENST00000549578 CHDHQ8NE62 594 aaPredicted RBP19.49■□□□□ 0.71
VPS29-206ENST00000549578 MAL2Q969L2 176 aa19.49■□□□□ 0.71
VPS29-206ENST00000549578 SDF2Q99470 211 aa19.49■□□□□ 0.71
VPS29-206ENST00000549578 KAT8Q9H7Z6 458 aaKnown RBP19.49■□□□□ 0.71
VPS29-206ENST00000549578 MRTO4Q9UKD2 239 aaKnown RBP19.49■□□□□ 0.71
VPS29-206ENST00000549578 LHX6Q9UPM6 363 aa19.49■□□□□ 0.71
VPS29-206ENST00000549578 BMP2P12643 396 aa19.48■□□□□ 0.71
VPS29-206ENST00000549578 CYP4B1P13584 511 aa19.48■□□□□ 0.71
VPS29-206ENST00000549578 MNAT1P51948 309 aa19.48■□□□□ 0.71
VPS29-206ENST00000549578 PNLIPRP2P54317 469 aa19.48■□□□□ 0.71
VPS29-206ENST00000549578 SLC25A3Q00325 362 aa19.48■□□□□ 0.71
VPS29-206ENST00000549578 ARHGAP11BQ3KRB8 267 aa19.48■□□□□ 0.71
VPS29-206ENST00000549578 RTL4Q6ZR62 310 aa19.48■□□□□ 0.71
VPS29-206ENST00000549578 DND1Q8IYX4 353 aaKnown RBP19.48■□□□□ 0.71
VPS29-206ENST00000549578 RBMXL3Q8N7X1 1067 aaKnown RBP19.48■□□□□ 0.71
VPS29-206ENST00000549578 ANKFN1Q8N957 763 aa19.48■□□□□ 0.71
VPS29-206ENST00000549578 OR10A6Q8NH74 314 aa19.48■□□□□ 0.71
VPS29-206ENST00000549578 HGDQ93099 445 aa19.48■□□□□ 0.71
VPS29-206ENST00000549578 TMEM125Q96AQ2 219 aa19.48■□□□□ 0.71
VPS29-206ENST00000549578 SH3GL1Q99961 368 aa19.48■□□□□ 0.71
VPS29-206ENST00000549578 HOPXQ9BPY8 73 aaPredicted RBP19.48■□□□□ 0.71
VPS29-206ENST00000549578 MFRPQ9BY79 579 aa19.48■□□□□ 0.71
VPS29-206ENST00000549578 HES7Q9BYE0 225 aa19.48■□□□□ 0.71
VPS29-206ENST00000549578 PIF1Q9H611 641 aa19.48■□□□□ 0.71
VPS29-206ENST00000549578 RYDENQ9NUL5 291 aaKnown RBP19.48■□□□□ 0.71
VPS29-206ENST00000549578 FLRT3Q9NZU0 649 aa19.48■□□□□ 0.71
VPS29-206ENST00000549578 B2RBV5 119 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 CDK2AP1O14519 115 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 SLC25A12O75746 678 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 AK1P00568 194 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 CCL3P10147 92 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 NR2F1P10589 423 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 SLC7A2P52569 658 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 PSMD4P55036 377 aaKnown RBP19.47■□□□□ 0.71
VPS29-206ENST00000549578 PSME3P61289 254 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.47■□□□□ 0.71
VPS29-206ENST00000549578 GPAT3Q53EU6 434 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 GCNT6Q5T4J0 391 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 C6orf89Q6UWU4 347 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 SGCZQ96LD1 299 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 NODALQ96S42 347 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 G6PC3Q9BUM1 346 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 SH2D2AQ9NP31 389 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 CMTM6Q9NX76 183 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.47■□□□□ 0.71
VPS29-206ENST00000549578 P2RX2Q9UBL9 471 aa19.47■□□□□ 0.71
VPS29-206ENST00000549578 CHCHD2Q9Y6H1 151 aaPredicted RBP19.47■□□□□ 0.71
VPS29-206ENST00000549578 C15orf38-AP3S2A0A0A6YYH1 394 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 TP53I11O14683 189 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 FCMRO60667 390 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 DPM1O60762 260 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 ABCB7O75027 752 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 ICOSLGO75144 302 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 ZIC2O95409 532 aaPredicted RBP19.46■□□□□ 0.71
VPS29-206ENST00000549578 BCHEP06276 602 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 CHRM4P08173 479 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 TFPTP0C1Z6 253 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 ATP6V1C1P21283 382 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 EFR3AQ14156 821 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 MAPK11Q15759 364 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 ADRM1Q16186 407 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 CYP51A1Q16850 503 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 BICRALQ6AI39 1079 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 NUP54Q7Z3B4 507 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 ARPINQ7Z6K5 226 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 SLC15A3Q8IY34 581 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 GOLM1Q8NBJ4 401 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 PSD4Q8NDX1 1056 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 SLC38A5Q8WUX1 472 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 ECSITQ9BQ95 431 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 KLHL1Q9NR64 748 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 THUMPD1Q9NXG2 353 aaKnown RBP19.46■□□□□ 0.71
VPS29-206ENST00000549578 LIPT1Q9Y234 373 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 ATRXP46100 2492 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 NPIPA5A0A0B4J1W7 369 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 NPIPA7E9PJI5 369 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 G3V3Y1 287 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 SLC28A2O43868 658 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 HS6ST1O60243 411 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 UTS2O95399 124 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 H6PDO95479 791 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 NPIPA8P0DM63 369 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 PRAMEF20Q5VT98 475 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms