RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 C8orf89P0DMQ9 161 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 TDGF1P13385 188 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 RNH1P13489 461 aaKnown RBP9.29□□□□□ -0.92
RAB5B-206ENST00000549505 STT3AP46977 705 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 HPCAP84074 193 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 PLAURQ03405 335 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 LARS2Q15031 903 aaKnown RBP9.29□□□□□ -0.92
RAB5B-206ENST00000549505 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.29□□□□□ -0.92
RAB5B-206ENST00000549505 DCST2Q5T1A1 773 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 PEAR1Q5VY43 1037 aaPredicted RBP9.29□□□□□ -0.92
RAB5B-206ENST00000549505 ARMC6Q6NXE6 501 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 ZNF613Q6PF04 617 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 PRSS41Q7RTY9 318 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 LSMEM1Q8N8F7 131 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 OR7G1Q8NGA0 311 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 OR10G6Q8NH81 332 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 BRIX1Q8TDN6 353 aaKnown RBP9.29□□□□□ -0.92
RAB5B-206ENST00000549505 CDS1Q92903 461 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 VSTM2LQ96N03 204 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 GPR55Q9Y2T6 319 aaPredicted RBP9.29□□□□□ -0.92
RAB5B-206ENST00000549505 MMACHCQ9Y4U1 282 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 SCAMP1O15126 338 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 AQP9O43315 295 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 CHST10O43529 356 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 HCRTR1O43613 425 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 NUDT21O43809 227 aaKnown RBP9.29□□□□□ -0.92
RAB5B-206ENST00000549505 CLPXO76031 633 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 RBM34P42696 430 aaKnown RBP9.29□□□□□ -0.92
RAB5B-206ENST00000549505 GIPRP48546 466 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 PSPHP78330 225 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 SIM1P81133 766 aaPredicted RBP9.29□□□□□ -0.92
RAB5B-206ENST00000549505 PIN1Q13526 163 aaPredicted RBP9.29□□□□□ -0.92
RAB5B-206ENST00000549505 GPAT3Q53EU6 434 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 GDPGP1Q6ZNW5 385 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 Q6ZPB1 254 aaPredicted RBP9.29□□□□□ -0.92
RAB5B-206ENST00000549505 NUP54Q7Z3B4 507 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 C16orf62Q7Z3J2 963 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 VRK2Q86Y07 508 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 KIF18BQ86Y91 864 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 TAGAPQ8N103 731 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 ZSCAN1Q8NBB4 408 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 KAT2AQ92830 837 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 GPA33Q99795 319 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 SEMA4GQ9NTN9 838 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 DIMT1Q9UNQ2 313 aaKnown RBP9.29□□□□□ -0.92
RAB5B-206ENST00000549505 RPL36Q9Y3U8 105 aaKnown RBP9.29□□□□□ -0.92
RAB5B-206ENST00000549505 A0A1W2PPW3 197 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 CCDC160A6NGH7 325 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 FAM170BA6NMN3 283 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 FCMRO60667 390 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 PIAS2O75928 621 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 MED26O95402 600 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 STATHP02808 62 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 GIMD1P0DJR0 217 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 PVRP15151 417 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 TRHRP34981 398 aaPredicted RBP9.29□□□□□ -0.92
RAB5B-206ENST00000549505 EMDP50402 254 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 PPP1CAP62136 330 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 PRKCDQ05655 676 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 ACSM1Q08AH1 577 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 CBX3Q13185 183 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 CYP27C1Q4G0S4 372 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 TRMT12Q53H54 448 aaKnown RBP9.29□□□□□ -0.92
RAB5B-206ENST00000549505 DEF8Q6ZN54 512 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 DGLUCYQ7Z3D6 616 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 P2RY8Q86VZ1 359 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 SFTPA2Q8IWL1 248 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 FRMD1Q8N878 549 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 B3GNT7Q8NFL0 401 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 OR1F2PQ96R84 312 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 KCNE5Q9UJ90 142 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 WDR45Q9Y484 360 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 IGKV3D-11A0A0A0MRZ8 115 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 PTGES3LE9PB15 166 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 NME6O75414 186 aaPredicted RBP9.28□□□□□ -0.92
RAB5B-206ENST00000549505 ADORA3P0DMS8 318 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 IGFBP4P22692 258 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 CSTF2P33240 577 aaKnown RBP eCLIP9.28□□□□□ -0.92
RAB5B-206ENST00000549505 FNTBP49356 437 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 PCYT1AP49585 367 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 SMSP52788 366 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 PSMD4P55036 377 aaKnown RBP9.28□□□□□ -0.92
RAB5B-206ENST00000549505 VSX2P58304 361 aaPredicted RBP9.28□□□□□ -0.92
RAB5B-206ENST00000549505 PIGFQ07326 219 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 SERTAD2Q14140 314 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 SPCS2Q15005 226 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 PTCRAQ6ISU1 281 aaPredicted RBP9.28□□□□□ -0.92
RAB5B-206ENST00000549505 WDR74Q6RFH5 385 aaPredicted RBP9.28□□□□□ -0.92
RAB5B-206ENST00000549505 TMPRSS11FQ6ZWK6 438 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 GDF7Q7Z4P5 450 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 CLIP4Q8N3C7 705 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 FAM71CQ8NEG0 241 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 GTPBP3Q969Y2 492 aaKnown RBP9.28□□□□□ -0.92
RAB5B-206ENST00000549505 ZG16BQ96DA0 208 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 SLC41A2Q96JW4 573 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 NLGN3Q9NZ94 848 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 CCDC59Q9P031 241 aaKnown RBP9.28□□□□□ -0.92
RAB5B-206ENST00000549505 TGFBR3LH3BV60 316 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 CT62P0C5K7 136 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 CTSKP43235 329 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms