RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 RFLNAQ6ZTI6 216 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 PTAR1Q7Z6K3 402 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 SYT9Q86SS6 491 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 TTC7BQ86TV6 843 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF100Q8IYN0 542 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 OR5K1Q8NHB7 308 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF420Q8TAQ5 688 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 IGFBPL1Q8WX77 278 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 THAP4Q8WY91 577 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 G6PC3Q9BUM1 346 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 TBC1D10AQ9BXI6 508 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 REXO4Q9GZR2 422 aaKnown RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 NANOGQ9H9S0 305 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 PNPOQ9NVS9 261 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 HEY2Q9UBP5 337 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 POMPQ9Y244 141 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 TBC1D3IA0A087WXS9 549 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 ANKUB1A6NFN9 424 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 ZAR1LA6NP61 321 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 GSTA4O15217 222 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 PPM1DO15297 605 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 PRAMEF2O60811 474 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 CHRNGP07510 517 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 CD3EP07766 207 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 FAM58BPP0C7Q3 252 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 GSTM3P21266 225 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 SEC24CP53992 1094 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 SLC26A5P58743 744 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 INSM1Q01101 510 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-212ENST00000549162 CEACAM7Q14002 265 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 ERV3-1Q14264 604 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 NPTX1Q15818 432 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 KLHL22Q53GT1 634 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 TMTC4Q5T4D3 741 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 SLX4IPQ5VYV7 408 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 RAET1GQ6H3X3 334 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 ANO7Q6IWH7 933 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 HMBOX1Q6NT76 420 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 HIPK1Q86Z02 1210 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 NAXDQ8IW45 347 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 SLC34A3Q8N130 599 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 OR52B6Q8NGF0 335 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF559Q9BR84 538 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 DOHHQ9BU89 302 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 TOLLIPQ9H0E2 274 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 MTHFD2LQ9H903 347 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-212ENST00000549162 CXorf21Q9HAI6 301 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 IL20RAQ9UHF4 553 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF318Q5VUA4 2279 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 LOC100289279A0A1B0GTE1 492 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 FTCDNL1E5RQL4 147 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 PRSS44E7EML9 344 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 F5H0A9 414 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-212ENST00000549162 TMPRSS2O15393 492 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 CTSVO60911 334 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 EML2O95834 649 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 IRF1P10914 325 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 CPN1P15169 458 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 BCKDHBP21953 392 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 PDHA2P29803 388 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 TTKP33981 857 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 PTGER4P35408 488 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 CSHL1Q14406 222 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF385BQ569K4 471 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 TYW3Q6IPR3 259 aaKnown RBP4.51□□□□□ -1.69
SCAF11-212ENST00000549162 CEACAM20Q6UY09 585 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 FRRS1Q6ZNA5 592 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 GDPGP1Q6ZNW5 385 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 RASSF6Q6ZTQ3 369 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 NANOGNBQ7Z5D8 188 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 FAM124AQ86V42 546 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 SLC35F3Q8IY50 421 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 OR10G6Q8NH81 332 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 PTPMT1Q8WUK0 201 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-212ENST00000549162 VPS33AQ96AX1 596 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 CENPNQ96H22 339 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-212ENST00000549162 DCLRE1CQ96SD1 692 aaKnown RBP4.51□□□□□ -1.69
SCAF11-212ENST00000549162 PRSS27Q9BQR3 290 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 OR2AG1Q9H205 316 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 DUSP21Q9H596 190 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 SUDS3Q9H7L9 328 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-212ENST00000549162 GLRX2Q9NS18 164 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 ACER3Q9NUN7 267 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 GDF2Q9UK05 429 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-212ENST00000549162 ATXN7L1Q9ULK2 861 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-212ENST00000549162 LSM2Q9Y333 95 aaKnown RBP4.51□□□□□ -1.69
SCAF11-212ENST00000549162 RNF11Q9Y3C5 154 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 MAD1L1Q9Y6D9 718 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 A0A1W2PQM1 296 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 A0A1W2PR48 441 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 LRRC14BA6NHZ5 514 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF724A8MTY0 619 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 LDB3O75112 727 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 PGM3O95394 542 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 ATP6V1G2O95670 118 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 ALPLP05186 524 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 ACADMP11310 421 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 EPXP11678 715 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 COX6A1P12074 109 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 TPH1P17752 444 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms