RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 SBK3P0C264 359 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 FPR1P21462 350 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 CRYGSP22914 178 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 FAM27E3Q08E93 113 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 CYP27C1Q4G0S4 372 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 Q5PR19 223 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 OR5M10Q6IEU7 315 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 LCA5Q86VQ0 697 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 IFT20Q8IY31 132 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 FAM9CQ8IZT9 166 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 MEIOBQ8N635 442 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 CDYL2Q8N8U2 506 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 OR9A2Q8NGT5 310 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 KAT2AQ92830 837 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 MTBPQ96DY7 904 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 C11orf24Q96F05 449 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-218ENST00000548945 PGM2Q96G03 612 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 COX4I2Q96KJ9 171 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 HBEGFQ99075 208 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 PARD6BQ9BYG5 372 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 CDC42EP4Q9H3Q1 356 aaKnown RBP11.61□□□□□ -0.55
PTCH1-218ENST00000548945 ZNF395Q9H8N7 513 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-218ENST00000548945 ANKRA2Q9H9E1 313 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 SDHAF3Q9NRP4 125 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 ARGLU1Q9NWB6 273 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-218ENST00000548945 SIRT5Q9NXA8 310 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 PPP4R1LQ9P1A2 415 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 DMGDHQ9UI17 866 aaKnown RBP11.61□□□□□ -0.55
PTCH1-218ENST00000548945 RAB21Q9UL25 225 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 STK38LQ9Y2H1 464 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 ZNF175Q9Y473 711 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 OR10H1Q9Y4A9 318 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 USF3Q68DE3 2245 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 A0A087WV62 115 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 CCDC151A5D8V7 595 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 TRIM49D1C9J1S8 452 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 SIAH2O43255 324 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 FADS1O60427 444 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 COQ9O75208 318 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 SMNDC1O75940 238 aaKnown RBP eCLIP11.6□□□□□ -0.55
PTCH1-218ENST00000548945 CD8BP10966 210 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 TSPAN8P19075 237 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 TAC1P20366 129 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 EVI2BP34910 448 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 UGT2B10P36537 528 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 KIR2DL2P43627 348 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-218ENST00000548945 RAE1P78406 368 aaKnown RBP11.6□□□□□ -0.55
PTCH1-218ENST00000548945 ACSM2AQ08AH3 577 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 ACKR1Q16570 336 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 GLYR1Q49A26 553 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-218ENST00000548945 ZNF678Q5SXM1 525 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 UBAP2Q5T6F2 1119 aaKnown RBP11.6□□□□□ -0.55
PTCH1-218ENST00000548945 ACSM2BQ68CK6 577 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 VWA1Q6PCB0 445 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 ZNF474Q6S9Z5 364 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-218ENST00000548945 C20orf204Q6ZNR8 217 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 GPRIN3Q6ZVF9 776 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 BTLAQ7Z6A9 289 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 SLC44A2Q8IWA5 706 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-218ENST00000548945 CNEP1R1Q8N9A8 125 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 C16orf78Q8WTQ4 265 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 DCAKDQ8WVC6 231 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 CAVIN3Q969G5 261 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 EXOSC8Q96B26 276 aaKnown RBP11.6□□□□□ -0.55
PTCH1-218ENST00000548945 EFHD2Q96C19 240 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-218ENST00000548945 FAM111AQ96PZ2 611 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 MED18Q9BUE0 208 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 BDH2Q9BUT1 245 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 ACPTQ9BZG2 426 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 RNF122Q9H9V4 155 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 SENP1Q9P0U3 644 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 SONP18583 2426 aaKnown RBP11.6□□□□□ -0.55
PTCH1-218ENST00000548945 RTTNQ86VV8 2226 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 STAB1Q9NY15 2570 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 PRR14LQ5THK1 2151 aa11.6□□□□□ -0.55
PTCH1-218ENST00000548945 SERTM1A2A2V5 107 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 MYO1GB0I1T2 1018 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 C16orf97H3BN30 126 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 ERLIN1O75477 346 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 SUPT7LO94864 414 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 CGAP01215 116 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 ENO1P06733 434 aaKnown RBP11.59□□□□□ -0.55
PTCH1-218ENST00000548945 SNRPAP09012 282 aaKnown RBP11.59□□□□□ -0.55
PTCH1-218ENST00000548945 POU2F1P14859 743 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 HK1P19367 917 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 HMOX2P30519 316 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 TIA1P31483 386 aaKnown RBP eCLIP11.59□□□□□ -0.55
PTCH1-218ENST00000548945 PKNOX1P55347 436 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 CLDN15P56746 228 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 VSNL1P62760 191 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 PSG6Q00889 435 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 UNC50Q53HI1 259 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 TCHHL1Q5QJ38 904 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-218ENST00000548945 LGSNQ5TDP6 509 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 RAET1LQ5VY80 246 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 Q71RC1 249 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-218ENST00000548945 EIF1ADQ8N9N8 165 aaKnown RBP11.59□□□□□ -0.55
PTCH1-218ENST00000548945 OR2M3Q8NG83 312 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 OR7G2Q8NG99 324 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 OR4N2Q8NGD1 307 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms