RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 OR1D4P47884 311 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 UGT2B15P54855 530 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 RGS8P57771 180 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-215ENST00000547672 DCDP81605 110 aaKnown RBP12.5□□□□□ -0.41
PTCH1-215ENST00000547672 TEKQ02763 1124 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 PPP1R8Q12972 351 aaKnown RBP12.5□□□□□ -0.41
PTCH1-215ENST00000547672 GPR68Q15743 365 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 DECR1Q16698 335 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 MINDY4Q4G0A6 757 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 HLA-DQA1Q5Y7H0 255 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 LAIR1Q6GTX8 287 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 ZNF574Q6ZN55 896 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-215ENST00000547672 DBX2Q6ZNG2 339 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 ZNF440Q8IYI8 595 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 SLC5A8Q8N695 610 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 ZNF527Q8NB42 609 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 OR52J3Q8NH60 311 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 CLIP3Q96DZ5 547 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 SENP5Q96HI0 755 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-215ENST00000547672 HRASLS5Q96KN8 279 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 CCDC74BQ96LY2 380 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 VSTM2LQ96N03 204 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 OR6C1Q96RD1 312 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 TEX12Q9BXU0 123 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 DGCR6LQ9BY27 220 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 UCK2Q9BZX2 261 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 SYNDIG1Q9H7V2 258 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 COPS7AQ9UBW8 275 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 MKLN1Q9UL63 735 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 ATXN7L1Q9ULK2 861 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-215ENST00000547672 NDRG4Q9ULP0 352 aaKnown RBP12.5□□□□□ -0.41
PTCH1-215ENST00000547672 TPRKBQ9Y3C4 175 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 CCDC88CQ9P219 2028 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 UNC13CQ8NB66 2214 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 CABIN1Q9Y6J0 2220 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 IGKV3D-11A0A0A0MRZ8 115 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 TCRBV16S1A1N1A0A5B0 115 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 PRAMEF25A6NGN4 478 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 NTN3O00634 580 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-215ENST00000547672 PCDH17O14917 1159 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 OR10H3O60404 316 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 FCMRO60667 390 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 SCRG1O75711 98 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 CDC123O75794 336 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-215ENST00000547672 CYP7B1O75881 506 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 SEC24DO94855 1032 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-215ENST00000547672 KCNK2O95069 426 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 CT62P0C5K7 136 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 CCDC159P0C7I6 412 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 FGF5P12034 268 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 DRD5P21918 477 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 ACP1P24666 158 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 PIGAP37287 484 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 PGDP52209 483 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 GABARAPL2P60520 117 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 RPP38P78345 283 aaKnown RBP12.49□□□□□ -0.41
PTCH1-215ENST00000547672 E2F1Q01094 437 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 ERV3-1Q14264 604 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 NSDHLQ15738 373 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 SYT16Q17RD7 645 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 NKAIN1Q4KMZ8 207 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 FLYWCH1Q4VC44 716 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 C6orf141Q5SZD1 244 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 PHF19Q5T6S3 580 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 CD300LDQ6UXZ3 194 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 ZNF550Q7Z398 422 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 GALNT5Q7Z7M9 940 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 GRAMD2AQ8IUY3 354 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 METTL27Q8N6F8 245 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-215ENST00000547672 METTL21AQ8WXB1 218 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 PITX2Q99697 317 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 ZNF559Q9BR84 538 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 RBCK1Q9BYM8 510 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 ARRDC1-AS1Q9H2J1 176 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 ANKRA2Q9H9E1 313 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 CCNB1IP1Q9NPC3 277 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 NECTIN3Q9NQS3 549 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 PNO1Q9NRX1 252 aaKnown RBP12.49□□□□□ -0.41
PTCH1-215ENST00000547672 RYDENQ9NUL5 291 aaKnown RBP12.49□□□□□ -0.41
PTCH1-215ENST00000547672 DHCR7Q9UBM7 475 aaKnown RBP12.49□□□□□ -0.41
PTCH1-215ENST00000547672 FTSJ1Q9UET6 329 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 NXT1Q9UKK6 140 aaKnown RBP12.49□□□□□ -0.41
PTCH1-215ENST00000547672 CBLCQ9ULV8 474 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 A4GNTQ9UNA3 340 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 ERVK-19Q9WJR5 959 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 PCDHGA10Q9Y5H3 936 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 SPTBN5Q9NRC6 3674 aaKnown RBP12.49□□□□□ -0.41
PTCH1-215ENST00000547672 TRIOO75962 3097 aa12.49□□□□□ -0.41
PTCH1-215ENST00000547672 IGLV3-12A0A075B6K2 115 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 SH3PXD2BA1X283 911 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 DPPA5A6NC42 116 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 TRIM64A6NGJ6 449 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 PATE3B3GLJ2 98 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 J3KTA2 159 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 NME6O75414 186 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-215ENST00000547672 KLK3P07288 261 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-215ENST00000547672 CBLP22681 906 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 KRT20P35900 424 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 HLCSP50747 726 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 ATP12AP54707 1039 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms