RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 GMPR2Q9P2T1 348 aaKnown RBP12.14□□□□□ -0.47
PTCH1-212ENST00000546744 SOWAHBA6NEL2 793 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 TMEM150CB9EJG8 249 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 SAP18O00422 153 aaKnown RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 SCDO00767 359 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 ZNF780AO75290 641 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 BEST1O76090 585 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 LATS1O95835 1130 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 ITGA5P08648 1049 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 LAG3P18627 525 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 CD9P21926 228 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 SOX2P48431 317 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 HTR6P50406 440 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 POU6F2P78424 691 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 ZNF674Q2M3X9 581 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 SLC8B1Q6J4K2 584 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 DNAJC5GQ8N7S2 189 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 OR1M1Q8NGA1 313 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 GPR148Q8TDV2 347 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 ZDHHC1Q8WTX9 485 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 ST8SIA4Q92187 359 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 TFGQ92734 400 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 ZNF419Q96HQ0 510 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 SPACA7Q96KW9 195 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 ISYNA1Q9NPH2 558 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 CAMK2AQ9UQM7 478 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 A0A1W2PQ45 241 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 A0A1W2PQY0 241 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 UPK3BL1B0FP48 263 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 ZNF736B4DX44 427 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 UPK3BL2E5RIL1 263 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 NEDD8-MDP1E9PL57 170 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 NUPL2O15504 423 aaKnown RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 SRPX2O60687 465 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 HCKP08631 526 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 ADRB3P13945 408 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 BEX3Q00994 111 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 ILKQ13418 452 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 DOC2AQ14183 400 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 DECR1Q16698 335 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 ALG10BQ5I7T1 473 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 LETMD1Q6P1Q0 360 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 TMEM200AQ86VY9 491 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 CBARPQ8N350 705 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 OR5D16Q8NGK9 328 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 GRHL3Q8TE85 626 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 GLYATL1Q969I3 302 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 MARC2Q969Z3 335 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 OTUB2Q96DC9 234 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 NUS1Q96E22 293 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 C16orf58Q96GQ5 468 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 ZNF778Q96MU6 729 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 ZNF583Q96ND8 569 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 DPH2Q9BQC3 489 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 PITHD1Q9GZP4 211 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 OR2AG1Q9H205 316 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 NDRG3Q9UGV2 375 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 RASD1Q9Y272 281 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 MRPS23Q9Y3D9 190 aaKnown RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 A0A0G2JLL6 359 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 TVP23AA6NH52 213 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 WASH3PC4AMC7 463 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 EEF1E1-BLOC1S5C9J1V9 151 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 AMY2BP19961 511 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 PSPHP78330 225 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 CRYZQ08257 329 aaKnown RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 SLAMF1Q13291 335 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 LRRC32Q14392 662 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 DUSP7Q16829 419 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 AWAT2Q6E213 333 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 ZNF585AQ6P3V2 769 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 TSSK4Q6SA08 328 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 PRRT2Q7Z6L0 340 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 SLC43A2Q8N370 569 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 CCDC71LQ8N9Z2 235 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 OR6N2Q8NGY6 317 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 OR52P1PQ8NH57 321 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 SLC22A8Q8TCC7 542 aa12.13□□□□□ -0.47
PTCH1-212ENST00000546744 MTHFD2LQ9H903 347 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-212ENST00000546744 GPR39O43194 453 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 ADAM23O75077 832 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 ADRB1P08588 477 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 OR4Q2P0C623 313 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 OR12D1P0DN82 309 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 CSKP41240 450 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 GIPRP48546 466 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 DGKEP52429 567 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 VSX2P58304 361 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-212ENST00000546744 HSD11B2P80365 405 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 RGMBQ6NW40 437 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 GPAT4Q86UL3 456 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 FAM124AQ86V42 546 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 OR4K14Q8NGD5 310 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 DOK1Q99704 481 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 SLC6A7Q99884 636 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 TBL1XR1Q9BZK7 514 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 GABARAPL1Q9H0R8 117 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 HEMK1Q9Y5R4 338 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-212ENST00000546744 AGAP14A8MT82 685 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 ANHXE9PGG2 379 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms