RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 Q9HAA7 133 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 ADGRL4Q9HBW9 690 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 PSORS1C1Q9UIG5 152 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 KLHL21Q9UJP4 597 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 MTF2Q9Y483 593 aaPredicted RBP3.03□□□□□ -1.92
SNHG1-224ENST00000545688 DMDP11532 3685 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 VPS13AQ96RL7 3174 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 MGAMO43451 1857 aa3.03□□□□□ -1.93
SNHG1-224ENST00000545688 PLXNB2O15031 1838 aa3.03□□□□□ -1.93
SNHG1-224ENST00000545688 PKD1L2Q7Z442 2459 aa3.02□□□□□ -1.93
SNHG1-224ENST00000545688 SLC30A4O14863 429 aa3.02□□□□□ -1.93
SNHG1-224ENST00000545688 DKC1O60832 514 aaKnown RBP eCLIP3.02□□□□□ -1.931e-36■■□□□ 12.2
SNHG1-224ENST00000545688 GOT2P00505 430 aaKnown RBP3.02□□□□□ -1.93
SNHG1-224ENST00000545688 IGHV3-9P01782 118 aa3.02□□□□□ -1.93
SNHG1-224ENST00000545688 APOA4P06727 396 aa3.02□□□□□ -1.93
SNHG1-224ENST00000545688 SNRPCP09234 159 aaKnown RBP3.02□□□□□ -1.93
SNHG1-224ENST00000545688 OVGP1Q12889 678 aa3.02□□□□□ -1.93
SNHG1-224ENST00000545688 OR1C1Q15619 314 aa3.02□□□□□ -1.93
SNHG1-224ENST00000545688 QRICH1Q2TAL8 776 aa3.02□□□□□ -1.93
SNHG1-224ENST00000545688 TRPV1Q8NER1 839 aa3.02□□□□□ -1.93
SNHG1-224ENST00000545688 OR13F1Q8NGS4 319 aa3.02□□□□□ -1.93
SNHG1-224ENST00000545688 SLCO4A1Q96BD0 722 aa3.02□□□□□ -1.93
SNHG1-224ENST00000545688 TECTBQ96PL2 329 aa3.02□□□□□ -1.93
SNHG1-224ENST00000545688 AGPAT1Q99943 283 aa3.02□□□□□ -1.93
SNHG1-224ENST00000545688 NUSAP1Q9BXS6 441 aaKnown RBP3.02□□□□□ -1.93
SNHG1-224ENST00000545688 SRD5A3Q9H8P0 318 aa3.02□□□□□ -1.93
SNHG1-224ENST00000545688 RAI14Q9P0K7 980 aa3.02□□□□□ -1.93
SNHG1-224ENST00000545688 POMT1Q9Y6A1 747 aa3.02□□□□□ -1.93
SNHG1-224ENST00000545688 PRRC2BQ5JSZ5 2229 aaKnown RBP3.02□□□□□ -1.93
SNHG1-224ENST00000545688 MAST2Q6P0Q8 1798 aa3.02□□□□□ -1.93
SNHG1-224ENST00000545688 RFX7Q2KHR2 1363 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 DLG5Q8TDM6 1919 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 GVINP1Q7Z2Y8 2422 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 CLSPNQ9HAW4 1339 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 ZFHX2Q9C0A1 2572 aaPredicted RBP3.01□□□□□ -1.93
SNHG1-224ENST00000545688 SH3PXD2BA1X283 911 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 FAM231BA6NCW3 169 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 K7ERI5 159 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 IFIT3O14879 490 aaKnown RBP3.01□□□□□ -1.93
SNHG1-224ENST00000545688 GYG1P46976 350 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 GABPAQ06546 454 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 ASAH1Q13510 395 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 C1orf189Q5VU69 101 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 CDC42EP5Q6NZY7 148 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 APOOLQ6UXV4 268 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 TIFABQ6ZNK6 161 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 KLHL7Q8IXQ5 586 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 THNSL1Q8IYQ7 743 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 TRPV3Q8NET8 790 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 FBXO25Q8TCJ0 367 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 TEKT1Q969V4 418 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 S1PR3Q99500 378 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 PORCNQ9H237 461 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 SLC25A19Q9HC21 320 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 GDF3Q9NR23 364 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 TECRQ9NZ01 308 aaKnown RBP3.01□□□□□ -1.93
SNHG1-224ENST00000545688 RLFQ13129 1914 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 FAM186AA6NE01 2351 aa3.01□□□□□ -1.93
SNHG1-224ENST00000545688 NCOR2Q9Y618 2525 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 ZNFX1Q9P2E3 1918 aaKnown RBP3□□□□□ -1.93
SNHG1-224ENST00000545688 H7C0S8 307 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 ZNF861PO60384 105 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 RAD51DO75771 328 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 CYBAP13498 195 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 CYP2B6P20813 491 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 MDKP21741 143 aaPredicted RBP3□□□□□ -1.93
SNHG1-224ENST00000545688 IL2RGP31785 369 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 MAGEB1P43366 347 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 ARHGAP1Q07960 439 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 CD47Q08722 323 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 TFCP2Q12800 502 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 GPR142Q7Z601 462 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 METTL23Q86XA0 190 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 RELL2Q8NC24 303 aaPredicted RBP3□□□□□ -1.93
SNHG1-224ENST00000545688 SETD7Q8WTS6 366 aaKnown RBP3□□□□□ -1.93
SNHG1-224ENST00000545688 RNF138Q8WVD3 245 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 IMMP1LQ96LU5 166 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 KIR2DL4Q99706 377 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 EBF4Q9BQW3 602 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 AP1M1Q9BXS5 423 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 CIDEBQ9UHD4 219 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 TBX21Q9UL17 535 aa3□□□□□ -1.93
SNHG1-224ENST00000545688 KMT2BQ9UMN6 2715 aaPredicted RBP3□□□□□ -1.93
SNHG1-224ENST00000545688 PTPRFP10586 1907 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 GAKO14976 1311 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 KIF16BQ96L93 1317 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 PHIPQ8WWQ0 1821 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 MEI4A8MW99 385 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 ATP9AO75110 1047 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 NME6O75414 186 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-224ENST00000545688 CNMDO75829 334 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 TIMP1P01033 207 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 EPOP01588 193 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 IGLV1-47P01700 117 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 UCP1P25874 307 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 P2RY4P51582 365 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 SLC34A1Q06495 639 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 TCP10Q12799 353 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 SPP2Q13103 211 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 SEL1L2Q5TEA6 688 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms