RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 BTBD9Q96Q07 612 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 PITHD1Q9GZP4 211 aaPredicted RBP13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 STMN4Q9H169 189 aaPredicted RBP13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 DPH5Q9H2P9 285 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 DSN1Q9H410 356 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 EHD1Q9H4M9 534 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 SLC17A6Q9P2U8 582 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 SNX8Q9Y5X2 465 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 SHISA8B8ZZ34 492 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 GOLGA8MH3BSY2 632 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 AHSGP02765 367 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 ZNF23P17027 643 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 EIF1AXP47813 144 aaKnown RBP13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 GAS1P54826 345 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 PLTPP55058 493 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 SPOCK1Q08629 439 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 ILF2Q12905 390 aaKnown RBP13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 EXOSC7Q15024 291 aaKnown RBP13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 CARTPTQ16568 116 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 TMEM35AQ53FP2 167 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 B3GLCTQ6Y288 498 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 GGNQ86UU5 652 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 CCDC25Q86WR0 208 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 LMNTD2Q8IXW0 634 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 C2CD4AQ8NCU7 369 aaPredicted RBP13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 ADCY4Q8NFM4 1077 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 OR4K17Q8NGC6 315 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 GFM2Q969S9 779 aaKnown RBP13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 TMBIM1Q969X1 311 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 COL21A1Q96P44 957 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 DHRS9Q9BPW9 319 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 PIMREGQ9BSJ6 248 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 NPAP1Q9NZP6 1156 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 PHF11Q9UIL8 331 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 ASB4Q9Y574 426 aa13.63□□□□□ -0.23
CLSTN3-216ENST00000545663 NCF1BA6NI72 391 aaPredicted RBP13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 NCF1CA8MVU1 366 aaPredicted RBP13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 TAPBPO15533 448 aa13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 TMPRSS11DO60235 418 aa13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 ADAP00813 363 aa13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 OPN1LWP04000 364 aa13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 NCF1P14598 390 aaPredicted RBP13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 PGAM1P18669 254 aa13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 PDLIM4P50479 330 aa13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 FABP6P51161 128 aa13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 RPS3AP61247 264 aaKnown RBP13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 SLC7A5Q01650 507 aa13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 KHDRBS2Q5VWX1 349 aaKnown RBP13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 FAM111BQ6SJ93 734 aa13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 SHISA2Q6UWI4 295 aa13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 FBXL14Q8N1E6 418 aa13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 PIAS4Q8N2W9 510 aaPredicted RBP13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 CALML6Q8TD86 181 aa13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 KISS1RQ969F8 398 aaPredicted RBP13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 TMCO6Q96DC7 493 aa13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 PTCD3Q96EY7 689 aaKnown RBP13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 ADOQ96SZ5 270 aa13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 GRHL1Q9NZI5 618 aa13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 MED11Q9P086 117 aa13.62□□□□□ -0.23
CLSTN3-216ENST00000545663 E7ESA3 106 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 EIF1AYO14602 144 aaKnown RBP13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 SMAD9O15198 467 aaKnown RBP13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 NME6O75414 186 aaPredicted RBP13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 REM1O75628 298 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 ALX3O95076 343 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 GSTA2P09210 222 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 NR2F6P10588 404 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 PCNAP12004 261 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 NT5EP21589 574 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 AGTR1P30556 359 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 CASP2P42575 452 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 HNMTP50135 292 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 STK11Q15831 433 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 SPANXN3Q5MJ09 141 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 TEX35Q5T0J7 233 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 NUFIP2Q7Z417 695 aaKnown RBP13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 FADS6Q8N9I5 356 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 OR2M3Q8NG83 312 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 OR7G1Q8NGA0 311 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 FBXO25Q8TCJ0 367 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 WDR34Q96EX3 536 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 PDLIM5Q96HC4 596 aaKnown RBP13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 SIGLEC10Q96LC7 697 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 FMO2Q99518 471 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 TMEM79Q9BSE2 394 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 FAM167BQ9BTA0 163 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 BCAP29Q9UHQ4 241 aa13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 DMGDHQ9UI17 866 aaKnown RBP13.61□□□□□ -0.23
CLSTN3-216ENST00000545663 OR6C70A6NIJ9 312 aa13.6□□□□□ -0.23
CLSTN3-216ENST00000545663 PLPP1O14494 284 aa13.6□□□□□ -0.23
CLSTN3-216ENST00000545663 EPORP19235 508 aa13.6□□□□□ -0.23
CLSTN3-216ENST00000545663 MRPS25P82663 173 aaKnown RBP13.6□□□□□ -0.23
CLSTN3-216ENST00000545663 CDKL1Q00532 357 aa13.6□□□□□ -0.23
CLSTN3-216ENST00000545663 MGAT2Q10469 447 aa13.6□□□□□ -0.23
CLSTN3-216ENST00000545663 PDIA2Q13087 525 aaKnown RBP13.6□□□□□ -0.23
CLSTN3-216ENST00000545663 FRG1Q14331 258 aaKnown RBP13.6□□□□□ -0.23
CLSTN3-216ENST00000545663 SLMAPQ14BN4 828 aa13.6□□□□□ -0.23
CLSTN3-216ENST00000545663 Q6ZSR9 355 aa13.6□□□□□ -0.23
CLSTN3-216ENST00000545663 CNPY4Q8N129 248 aa13.6□□□□□ -0.23
CLSTN3-216ENST00000545663 OR52B6Q8NGF0 335 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms