RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 TCAF1Q9Y4C2 921 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 CLDN16Q9Y5I7 305 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 MAD1L1Q9Y6D9 718 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 SPACA6W5XKT8 324 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 A0A1W2PRX2 142 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 OR6C76A6NM76 312 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 CXorf49A8MYA2 514 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 E7EVH7 732 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 TRIM77I1YAP6 450 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 AP3B1O00203 1094 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 NDUFS8O00217 210 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 F2RL2O00254 374 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 CDC7O00311 574 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 CYR61O00622 381 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 PJA2O43164 708 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 FRS3O43559 492 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 CDC14BO60729 498 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 NIPSNAP2O75323 286 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 CBR3O75828 277 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 TJP3O95049 919 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 METTL18O95568 372 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 TGFAP01135 160 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 CGAP01215 116 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 C8GP07360 202 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 HIST1H2AGP0C0S8 130 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 FCGR2AP12318 317 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 APEHP13798 732 aaKnown RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 NPPBP16860 134 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 HIST1H2ADP20671 130 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 OGNP20774 298 aaKnown RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 SAT1P21673 171 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 COMTP21964 271 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 DPP4P27487 766 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 LHX2P50458 406 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 LIM2P55344 173 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 ZBED6P86452 979 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 PLIN5Q00G26 463 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 TGM3Q08188 693 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 GPS1Q13098 491 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 SNTA1Q13424 505 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 NAE1Q13564 534 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 CSHL1Q14406 222 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 EXOC3L2Q2M3D2 409 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 PGGHGQ32M88 737 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 TOR1AIP1Q5JTV8 583 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 PCID2Q5JVF3 399 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 NCMAPQ5T1S8 102 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 DUPD1Q68J44 220 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 TIGD3Q6B0B8 471 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 TMEM81Q6P7N7 255 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 TRIM40Q6P9F5 258 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 AGTRAPQ6RW13 159 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 FAM111BQ6SJ93 734 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 SASS6Q6UVJ0 657 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 PLXDC2Q6UX71 529 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 DOK3Q7L591 496 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 SSX8Q7RTT4 187 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 YRDCQ86U90 279 aaKnown RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 GPSM1Q86YR5 675 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 C9orf40Q8IXQ3 194 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 KRT78Q8N1N4 520 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 ZNF321PQ8N8H1 164 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 PRELID2Q8N945 189 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 BANPQ8N9N5 519 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 FAM47BQ8NA70 645 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 IL17RDQ8NFM7 739 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 STEAP2Q8NFT2 490 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 SEMA6DQ8NFY4 1073 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 OR52K1Q8NGK4 314 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 SLC35B2Q8TB61 432 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 C10orf105Q8TEF2 133 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 ZNF418Q8TF45 676 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 FAM216AQ8WUB2 273 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 SLC5A11Q8WWX8 675 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 LRTOMTQ8WZ04 291 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 LPGAT1Q92604 370 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 KRT35Q92764 455 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 KCNJ9Q92806 393 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 FAM136AQ96C01 138 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 CTHRC1Q96CG8 243 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 MSI2Q96DH6 328 aaKnown RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 SNF8Q96H20 258 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 RBM18Q96H35 190 aaKnown RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 SENP5Q96HI0 755 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 FBXL20Q96IG2 436 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 DGAT2Q96PD7 388 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 KCNC2Q96PR1 638 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 GAL3ST4Q96RP7 486 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 SERINC2Q96SA4 455 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 AIF1LQ9BQI0 150 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 PELOQ9BRX2 385 aaKnown RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 H2AFJQ9BTM1 129 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 NTMT1Q9BV86 223 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 HEMGNQ9BXL5 484 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 PACSIN1Q9BY11 444 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 OR2B2Q9GZK3 357 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 ACTR6Q9GZN1 396 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 ROGDIQ9GZN7 287 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 C11orf54Q9H0W9 315 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 COPS7BQ9H9Q2 264 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms