RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 UBQLN3Q9H347 655 aa17.5■□□□□ 0.39
DDX55-211ENST00000544429 SEC14L3Q9UDX4 400 aa17.5■□□□□ 0.39
DDX55-211ENST00000544429 BOKQ9UMX3 212 aaPredicted RBP17.5■□□□□ 0.39
DDX55-211ENST00000544429 PCDHGB4Q9UN71 923 aa17.5■□□□□ 0.39
DDX55-211ENST00000544429 NPIPA1Q9UND3 350 aa17.5■□□□□ 0.39
DDX55-211ENST00000544429 RNF103-CHMP3A0A140T963 221 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 PRAMEF25A6NGN4 478 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 TFECO14948 347 aaPredicted RBP17.49■□□□□ 0.39
DDX55-211ENST00000544429 FADS1O60427 444 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 KCNK2O95069 426 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 UNC5CO95185 931 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 IGHG3P01860 377 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 KRT16P08779 473 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 ALOX5P09917 674 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 RFPL3SP0C7P2 107 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 IL12BP29460 328 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 KRT20P35900 424 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 CDKN2CP42773 168 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 SRSF1Q07955 248 aaKnown RBP eCLIP17.49■□□□□ 0.392e-8■■■□□ 17.5
DDX55-211ENST00000544429 SPDYE7PQ495Y7 208 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 METTL21CQ5VZV1 264 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 BLOC1S3Q6QNY0 202 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 C6orf120Q7Z4R8 191 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 FGD2Q7Z6J4 655 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 CLEC4FQ8N1N0 589 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 FAM109AQ8N4B1 249 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 FBXO30Q8TB52 745 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 NEURL3Q96EH8 262 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 ZNF597Q96LX8 424 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 YIPF4Q9BSR8 244 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 INPP5KQ9BT40 448 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 BTBD2Q9BX70 525 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 METTL7AQ9H8H3 244 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 QPCTLQ9NXS2 382 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 MRTO4Q9UKD2 239 aaKnown RBP17.49■□□□□ 0.39
DDX55-211ENST00000544429 ABCG2Q9UNQ0 655 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 ZNF835Q9Y2P0 537 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 HRH3Q9Y5N1 445 aa17.49■□□□□ 0.39
DDX55-211ENST00000544429 USP9XQ93008 2570 aaPredicted RBP17.49■□□□□ 0.39
DDX55-211ENST00000544429 PCNX3Q9H6A9 2034 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 A0A0G2JND7 137 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 CCDC154A6NI56 674 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 B4DXG7 233 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 ACOT7O00154 380 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 SNPHO15079 494 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 KCNH1O95259 989 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 CPSF4O95639 269 aaKnown RBP17.48■□□□□ 0.39
DDX55-211ENST00000544429 C1QCP02747 245 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 NGFRP08138 427 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 STSP08842 583 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 ZCCHC18P0CG32 403 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 HOXB9P17482 250 aaPredicted RBP17.48■□□□□ 0.39
DDX55-211ENST00000544429 SOAT1P35610 550 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 MAGEA5P43359 124 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 PSMD4P55036 377 aaKnown RBP17.48■□□□□ 0.39
DDX55-211ENST00000544429 KCNK10P57789 538 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 STX1BP61266 288 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 KCNC4Q03721 635 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 AP1ARQ63HQ0 302 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 TIGD3Q6B0B8 471 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 GFRALQ6UXV0 394 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 PACS2Q86VP3 889 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 WDSUB1Q8N9V3 476 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 OTUB1Q96FW1 271 aaPredicted RBP17.48■□□□□ 0.39
DDX55-211ENST00000544429 RMND5BQ96G75 393 aaPredicted RBP17.48■□□□□ 0.39
DDX55-211ENST00000544429 PHF12Q96QT6 1004 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 PANX1Q96RD7 426 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 OSBPL11Q9BXB4 747 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 GALNT9Q9HCQ5 603 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 SLC6A13Q9NSD5 602 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 FBXO34Q9NWN3 711 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 FLRT3Q9NZU0 649 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 FAF1Q9UNN5 650 aaPredicted RBP17.48■□□□□ 0.39
DDX55-211ENST00000544429 KCNE3Q9Y6H6 103 aa17.48■□□□□ 0.39
DDX55-211ENST00000544429 A0A1B0GVC2 190 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 FAM166BA8MTA8 275 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 VIMP08670 466 aaKnown RBP17.47■□□□□ 0.39
DDX55-211ENST00000544429 CELA3AP09093 270 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 TROVE2P10155 538 aaKnown RBP eCLIP17.47■□□□□ 0.39
DDX55-211ENST00000544429 CD1EP15812 388 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 ELAVL4P26378 380 aaKnown RBP17.47■□□□□ 0.39
DDX55-211ENST00000544429 LCN1P31025 176 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 EVI2BP34910 448 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 PLGLB1Q02325 96 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 SQLEQ14534 574 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 EIF2S3LQ2VIR3 472 aaKnown RBP17.47■□□□□ 0.39
DDX55-211ENST00000544429 Q6ZPB1 254 aaPredicted RBP17.47■□□□□ 0.39
DDX55-211ENST00000544429 ZAR1Q86SH2 424 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 GHDCQ8N2G8 530 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 CHDHQ8NE62 594 aaPredicted RBP17.47■□□□□ 0.39
DDX55-211ENST00000544429 GTF2H4Q92759 462 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 CDS1Q92903 461 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 VPS33AQ96AX1 596 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 OR7D2Q96RA2 312 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 TMEM120AQ9BXJ8 343 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 RTN4RQ9BZR6 473 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 ACKR4Q9NPB9 350 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 C15orf41Q9Y2V0 281 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 WIF1Q9Y5W5 379 aa17.47■□□□□ 0.39
DDX55-211ENST00000544429 BAHCC1Q9P281 2608 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms