RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 AICDAQ9GZX7 198 aa14.09□□□□□ -0.15
CHFR-223ENST00000544268 TMEM38AQ9H6F2 299 aa14.09□□□□□ -0.15
CHFR-223ENST00000544268 HSPB11Q9Y547 144 aa14.09□□□□□ -0.15
CHFR-223ENST00000544268 MUC3AQ02505 3323 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 SLC35F4A4IF30 521 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 RGS5O15539 181 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 NTN1O95631 604 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 CNR2P34972 360 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 BSGP35613 385 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 LIMS1P48059 325 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 MANFP55145 182 aaKnown RBP14.08□□□□□ -0.16
CHFR-223ENST00000544268 KIAA1024LP59773 190 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 NFATC4Q14934 902 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 CRB2Q5IJ48 1285 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 ENPP7Q6UWV6 458 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 ZNF605Q86T29 641 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 FAM160A2Q8N612 972 aaPredicted RBP14.08□□□□□ -0.16
CHFR-223ENST00000544268 OR10Z1Q8NGY1 313 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 ZFPM2Q8WW38 1151 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 OR1E3Q8WZA6 343 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 SCARF2Q96GP6 870 aaPredicted RBP14.08□□□□□ -0.16
CHFR-223ENST00000544268 CRELD1Q96HD1 420 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 YIPF4Q9BSR8 244 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 ANKRA2Q9H9E1 313 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 SLC23A1Q9UHI7 598 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 ACSL5Q9ULC5 683 aa14.08□□□□□ -0.16
CHFR-223ENST00000544268 EFCAB10A6NFE3 127 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 SEC14L5O43304 696 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 HOXC4P09017 264 aaPredicted RBP14.07□□□□□ -0.16
CHFR-223ENST00000544268 HOXB1P14653 301 aaPredicted RBP14.07□□□□□ -0.16
CHFR-223ENST00000544268 ZBTB37Q5TC79 503 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 C19orf48Q6RUI8 117 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 HDDC2Q7Z4H3 204 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 DCUN1D3Q8IWE4 304 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 OR5K2Q8NHB8 316 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 RAD51AP1Q96B01 352 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 CXorf40BQ96DE9 158 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 WDFY2Q96P53 400 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 MENTQ9BUN1 341 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 SYNPO2LQ9H987 977 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 ING3Q9NXR8 418 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 SNRNP200O75643 2136 aaKnown RBP14.07□□□□□ -0.16
CHFR-223ENST00000544268 KNL1Q8NG31 2342 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 A0A1W2PPV9 198 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 PRR19A6NJB7 356 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 C4orf51C9J302 202 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 DPM1O60762 260 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 SLC22A5O76082 557 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 PDE9AO76083 593 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 ALAS2P22557 587 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 PTX3P26022 381 aaPredicted RBP14.07□□□□□ -0.16
CHFR-223ENST00000544268 AKT2P31751 481 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 PXNP49023 591 aaPredicted RBP14.07□□□□□ -0.16
CHFR-223ENST00000544268 DAB2P98082 770 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 IKZF1Q13422 519 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 QPRTQ15274 297 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 SYPL1Q16563 259 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 KHDRBS2Q5VWX1 349 aaKnown RBP14.07□□□□□ -0.16
CHFR-223ENST00000544268 PAMR1Q6UXH9 720 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 DEF8Q6ZN54 512 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 RD3Q7Z3Z2 195 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 ADCK2Q7Z695 626 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 UBE3DQ7Z6J8 389 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 KRT73Q86Y46 540 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 STX19Q8N4C7 294 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 TMEM145Q8NBT3 493 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 GPR151Q8TDV0 419 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 APOBEC4Q8WW27 367 aaKnown RBP14.07□□□□□ -0.16
CHFR-223ENST00000544268 GEMIN6Q8WXD5 167 aaKnown RBP14.07□□□□□ -0.16
CHFR-223ENST00000544268 TSACCQ96A04 125 aaPredicted RBP14.07□□□□□ -0.16
CHFR-223ENST00000544268 SHDQ96IW2 340 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 INSM2Q96T92 566 aaPredicted RBP14.07□□□□□ -0.16
CHFR-223ENST00000544268 PRR14Q9BWN1 585 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 GPR174Q9BXC1 333 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 C11orf54Q9H0W9 315 aaPredicted RBP14.07□□□□□ -0.16
CHFR-223ENST00000544268 THSD1Q9NS62 852 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 SIRT3Q9NTG7 399 aaPredicted RBP14.07□□□□□ -0.16
CHFR-223ENST00000544268 IMPAD1Q9NX62 359 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 WSB2Q9NYS7 404 aaPredicted RBP14.07□□□□□ -0.16
CHFR-223ENST00000544268 POFUT2Q9Y2G5 429 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 ENPP4Q9Y6X5 453 aa14.07□□□□□ -0.16
CHFR-223ENST00000544268 IGKV1-8A0A0C4DH67 115 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 PI15O43692 258 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 DDCP20711 480 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 AZGP1P25311 298 aaKnown RBP14.06□□□□□ -0.16
CHFR-223ENST00000544268 KIAA0895LQ68EN5 471 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 TMEM65Q6PI78 240 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 C12orf66Q96MD2 445 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 WDR92Q96MX6 357 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 NLNQ9BYT8 704 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 KLHL31Q9H511 634 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 COQ3Q9NZJ6 369 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 I3L521 148 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 HMGN4O00479 90 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 OR1F1O43749 312 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 CCNB2O95067 398 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 CKMT1AP12532 417 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 ANXA8P13928 327 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 KELP23276 732 aa14.06□□□□□ -0.16
CHFR-223ENST00000544268 SNRPNP63162 240 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms