RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 FAM173AQ9BQD7 235 aa5.81□□□□□ -1.48
LTBR-212ENST00000543542 DOHHQ9BU89 302 aa5.81□□□□□ -1.48
LTBR-212ENST00000543542 THUMPD3Q9BV44 507 aaKnown RBP5.81□□□□□ -1.48
LTBR-212ENST00000543542 BTBD2Q9BX70 525 aa5.81□□□□□ -1.48
LTBR-212ENST00000543542 OSBPL11Q9BXB4 747 aa5.81□□□□□ -1.48
LTBR-212ENST00000543542 TBL1XR1Q9BZK7 514 aa5.81□□□□□ -1.48
LTBR-212ENST00000543542 PAIP1Q9H074 479 aaKnown RBP5.81□□□□□ -1.48
LTBR-212ENST00000543542 TPT1P8Q9HAU6 139 aa5.81□□□□□ -1.48
LTBR-212ENST00000543542 SERHLQ9NQF3 203 aa5.81□□□□□ -1.48
LTBR-212ENST00000543542 DUSP22Q9NRW4 184 aa5.81□□□□□ -1.48
LTBR-212ENST00000543542 AGPAT4Q9NRZ5 378 aa5.81□□□□□ -1.48
LTBR-212ENST00000543542 GPATCH2Q9NW75 528 aa5.81□□□□□ -1.48
LTBR-212ENST00000543542 GIN1Q9NXP7 522 aa5.81□□□□□ -1.48
LTBR-212ENST00000543542 NTMQ9P121 344 aa5.81□□□□□ -1.48
LTBR-212ENST00000543542 CORO2BQ9UQ03 480 aa5.81□□□□□ -1.48
LTBR-212ENST00000543542 PCDHB14Q9Y5E9 798 aa5.81□□□□□ -1.48
LTBR-212ENST00000543542 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.81□□□□□ -1.48
LTBR-212ENST00000543542 EXPH5Q8NEV8 1989 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 C2orf72A6NCS6 295 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 ASPDHA6ND91 283 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 PRAMEF25A6NGN4 478 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 FAM166BA8MTA8 275 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 H3BNH8 94 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 SCDO00767 359 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 GNB5O14775 395 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 AIM2O14862 343 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 TFECO14948 347 aaPredicted RBP5.8□□□□□ -1.48
LTBR-212ENST00000543542 ASNA1O43681 348 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 SLC28A2O43868 658 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 CDC40O60508 579 aaKnown RBP eCLIP5.8□□□□□ -1.48
LTBR-212ENST00000543542 TSPAN2O60636 221 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 STX11O75558 287 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 KCNK2O95069 426 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 UTS2O95399 124 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 ETFAP13804 333 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 CD1EP15812 388 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 CASP3P42574 277 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 MLLT10P55197 1068 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 DSTNP60981 165 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 TXNL4AP83876 142 aaKnown RBP5.8□□□□□ -1.48
LTBR-212ENST00000543542 PMP22Q01453 160 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 ALDH6A1Q02252 535 aaKnown RBP5.8□□□□□ -1.48
LTBR-212ENST00000543542 C19orf57Q0VDD7 668 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 GNA13Q14344 377 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 CAPRIN1Q14444 709 aaKnown RBP5.8□□□□□ -1.48
LTBR-212ENST00000543542 GPR68Q15743 365 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 INAQ16352 499 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 TRMT5Q32P41 509 aaKnown RBP5.8□□□□□ -1.48
LTBR-212ENST00000543542 FLYWCH1Q4VC44 716 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 SOWAHCQ53LP3 525 aaPredicted RBP5.8□□□□□ -1.48
LTBR-212ENST00000543542 COX20Q5RI15 118 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.8□□□□□ -1.48
LTBR-212ENST00000543542 BICRALQ6AI39 1079 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 DESI1Q6ICB0 168 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 SLC30A6Q6NXT4 461 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 RPUSD3Q6P087 351 aaKnown RBP5.8□□□□□ -1.48
LTBR-212ENST00000543542 LYPD8Q6UX82 237 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 FBXW8Q8N3Y1 598 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 ZNF527Q8NB42 609 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 OR2M7Q8NG81 312 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 OR52N2Q8NGI0 321 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 CPT1CQ8TCG5 803 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 SPPL2AQ8TCT8 520 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 PAQR8Q8TEZ7 354 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 HGDQ93099 445 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 ROPN1LQ96C74 230 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 RCN3Q96D15 328 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 DTNBP1Q96EV8 351 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 ZNF597Q96LX8 424 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 PHF12Q96QT6 1004 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 NODALQ96S42 347 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 SECISBP2Q96T21 854 aaKnown RBP5.8□□□□□ -1.48
LTBR-212ENST00000543542 SH3GL1Q99961 368 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 CCDC106Q9BWC9 280 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 HOXD1Q9GZZ0 328 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 EXO5Q9H790 373 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 TRIM45Q9H8W5 580 aaPredicted RBP5.8□□□□□ -1.48
LTBR-212ENST00000543542 EFCAB1Q9HAE3 211 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 SDHAF3Q9NRP4 125 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 SLC6A13Q9NSD5 602 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 OLAHQ9NV23 265 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 THUMPD1Q9NXG2 353 aaKnown RBP5.8□□□□□ -1.48
LTBR-212ENST00000543542 VAPAQ9P0L0 249 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 SLAMF8Q9P0V8 285 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 PPP4R1LQ9P1A2 415 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 P2RX2Q9UBL9 471 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 B4GALT7Q9UBV7 327 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 BOKQ9UMX3 212 aaPredicted RBP5.8□□□□□ -1.48
LTBR-212ENST00000543542 L3MBTL1Q9Y468 752 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 WDR45Q9Y484 360 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 PCDHGB6Q9Y5F9 930 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 PCDHGA10Q9Y5H3 936 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 KCNE3Q9Y6H6 103 aa5.8□□□□□ -1.48
LTBR-212ENST00000543542 CACNA1BQ00975 2339 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 EML6Q6ZMW3 1958 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 PKD1L2Q7Z442 2459 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 NPIPA5A0A0B4J1W7 369 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 B8ZZF3 427 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 FAM47E-STBD1D6RA91 191 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 NPIPA7E9PJI5 369 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 493.6 ms