RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 SLC6A15Q9H2J7 730 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 UBQLN3Q9H347 655 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 KLRF1Q9NZS2 232 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 SPRR3Q9UBC9 169 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 TNFRSF10DQ9UBN6 386 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 MRTO4Q9UKD2 239 aaKnown RBP8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 C15orf41Q9Y2V0 281 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 LRBAP50851 2863 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 TMEM120BA0PK00 339 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PRAMEF25A6NGN4 478 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ITM2AO43736 263 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 LYPLA1O75608 230 aaPredicted RBP8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PSMG1O95456 288 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 HSPA4LO95757 839 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 DHRS4L1P0CG22 281 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 GLI4P10075 376 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PRPS2P11908 318 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ENDOUP21128 410 aaKnown RBP8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 GRK2P25098 689 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PTPN6P29350 595 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CHRNB4P30926 498 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PTGER4P35408 488 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 HPCAL1P37235 193 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 RPL3P39023 403 aaKnown RBP8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 FRKP42685 505 aaPredicted RBP8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 SLC1A6P48664 564 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PSG6Q00889 435 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ZNF155Q12901 538 aaPredicted RBP8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 STX3Q13277 289 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PDE7AQ13946 482 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 MPP2Q14168 576 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 SF3B4Q15427 424 aaKnown RBP eCLIP8.88□□□□□ -0.998e-10■■■□□ 18.7
TNFRSF1A-214ENST00000543048 CHI3L2Q15782 390 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 DECR1Q16698 335 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 EIPR1Q53HC9 387 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 NHSL2Q5HYW2 709 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 C1orf185Q5T7R7 199 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 IL23RQ5VWK5 629 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CES4AQ5XG92 561 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 VASNQ6EMK4 673 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 RTL6Q6ICC9 239 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 B3GNT6Q6ZMB0 384 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 NATD1Q8N6N6 113 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 WDSUB1Q8N9V3 476 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 OR10Q1Q8NGQ4 319 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CLHC1Q8NHS4 586 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CIDECQ96AQ7 238 aaPredicted RBP8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 TUBGCP3Q96CW5 907 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 DTNBP1Q96EV8 351 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ZBED6CLQ96FA7 236 aaPredicted RBP8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PRPF18Q99633 342 aaKnown RBP8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 TIMP4Q99727 224 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 OCSTAMPQ9BR26 566 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 TTYH2Q9BSA4 534 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ZNF395Q9H8N7 513 aaPredicted RBP8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 C3orf14Q9HBI5 128 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ACSS1Q9NUB1 689 aaPredicted RBP8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 DDX18Q9NVP1 670 aaKnown RBP8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 NTMQ9P121 344 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 GIMAP2Q9UG22 337 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ATP6V1HQ9UI12 483 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CBLCQ9ULV8 474 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 RNF6Q9Y252 685 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 EIF3LQ9Y262 564 aaKnown RBP8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 TACC2O95359 2948 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ABCA12Q86UK0 2595 aa8.88□□□□□ -0.99
TNFRSF1A-214ENST00000543048 KIAA1549Q9HCM3 1950 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 C15orf38-AP3S2A0A0A6YYH1 394 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 FAM47E-STBD1D6RA91 191 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 POLR3GO15318 223 aaPredicted RBP8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 EMC8O43402 210 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 SKAP2O75563 359 aaPredicted RBP8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 IL33O95760 270 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CYP4B1P13584 511 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 COX6B1P14854 86 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 BMP7P18075 431 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 GABRA3P34903 492 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 GCKP35557 465 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 RPL14P50914 215 aaKnown RBP8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 SLC18A1P54219 525 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PRKAG1P54619 331 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PSMD4P55036 377 aaKnown RBP8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 EMX2Q04743 252 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 HSPB3Q12988 150 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 MAD2L1Q13257 205 aaPredicted RBP8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 MLC1Q15049 377 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 SMU1Q2TAY7 513 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 VPS26BQ4G0F5 336 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ZNF385BQ569K4 471 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 WIPI1Q5MNZ9 446 aaPredicted RBP8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CPTPQ5TA50 214 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 HHATQ5VTY9 493 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ZCCHC12Q6PEW1 402 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 YRDCQ86U90 279 aaKnown RBP8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PLCZ1Q86YW0 608 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CCDC71Q8IV32 467 aaPredicted RBP8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 KIRREL3Q8IZU9 778 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 RPRMLQ8N4K4 120 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 FNDC5Q8NAU1 212 aa8.87□□□□□ -0.99
TNFRSF1A-214ENST00000543048 FAM83FQ8NEG4 500 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms