RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 PQLC3Q8N755 202 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 OR13C9Q8NGT0 318 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 PHOSPHO2Q8TCD6 241 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 PPP4R1Q8TF05 950 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 SCFD1Q8WVM8 642 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 ST8SIA1Q92185 356 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 SMPDL3BQ92485 455 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 P3H4Q92791 437 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 TAAR8Q969N4 342 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 TP53INP1Q96A56 240 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 TMA16Q96EY4 203 aaKnown RBP5.06□□□□□ -1.6
DDB1-219ENST00000541513 TOX2Q96NM4 488 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 ZNF317Q96PQ6 595 aaPredicted RBP5.06□□□□□ -1.6
DDB1-219ENST00000541513 ALS2CR12Q96Q35 445 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 MMS19Q96T76 1030 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 HSD17B14Q9BPX1 270 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 BBS2Q9BXC9 721 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 SCAND2PQ9GZW5 306 aaPredicted RBP5.06□□□□□ -1.6
DDB1-219ENST00000541513 ACTL8Q9H568 366 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 MARCH7Q9H992 704 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 ANKRA2Q9H9E1 313 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 CSNK1G1Q9HCP0 422 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 ZNF302Q9NR11 478 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 PHPT1Q9NRX4 125 aaPredicted RBP5.06□□□□□ -1.6
DDB1-219ENST00000541513 NLGN3Q9NZ94 848 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 SENP1Q9P0U3 644 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 LRWD1Q9UFC0 647 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 ADAM28Q9UKQ2 775 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 WDR83OSQ9Y284 106 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 PPIAL4AQ9Y536 164 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 SRPRBQ9Y5M8 271 aaKnown RBP5.06□□□□□ -1.6
DDB1-219ENST00000541513 SIP14410 1827 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 MICAL3Q7RTP6 2002 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 MYO9BQ13459 2157 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 GRIN2DO15399 1336 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 NRCAMQ92823 1304 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 PPIAL4CA0A0B4J2A2 164 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 MTMR11A4FU01 709 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 STX7O15400 261 aaKnown RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 CALUO43852 315 aaPredicted RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 GLRA3O75311 464 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 CLDN7O95471 211 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 WDPCPO95876 746 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 CST1P01037 141 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 EGFP01133 1207 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 CYP1A1P04798 512 aaPredicted RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 ACAA1P09110 424 aaPredicted RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 NPSP0C0P6 89 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 HIST1H2AGP0C0S8 130 aaPredicted RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 H2AFB1P0C5Y9 115 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 H2AFB2P0C5Z0 115 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 SMIM10L2AP0DMW4 78 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 SMIM10L2BP0DMW5 78 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 PPIAL4GP0DN37 164 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 IRF2P14316 349 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 ZNF23P17027 643 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 CTRB1P17538 263 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 CRATP43155 626 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 CTSCP53634 463 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 MAZP56270 477 aaKnown RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 CRYZQ08257 329 aaKnown RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 LGALS3BPQ08380 585 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 BST2Q10589 180 aaKnown RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 NFATC2Q13469 925 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 MESDQ14696 234 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 GANABQ14697 944 aaKnown RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 TGFBIQ15582 683 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 RAB6CQ53S08 254 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 BEX5Q5H9J7 111 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 LCN1P1Q5VSP4 162 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 LIPNQ5VXI9 398 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 CTRB2Q6GPI1 263 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 DCDC5Q6ZRR9 648 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 FRA10AC1Q70Z53 315 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 BCDIN3DQ7Z5W3 292 aaKnown RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 TFAP2DQ7Z6R9 452 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 LRRC6Q86X45 466 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 CDKL3Q8IVW4 592 aaPredicted RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 ADHFE1Q8IWW8 467 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 UEVLDQ8IX04 471 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 THAP8Q8NA92 274 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 TXNDC5Q8NBS9 432 aaKnown RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 OR5M8Q8NGP6 311 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 HIST1H2ACQ93077 130 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 MRGPRFQ96AM1 343 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 SLC25A36Q96CQ1 311 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 COQ8BQ96D53 544 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 GRAMD2BQ96HH9 432 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 IGSF21Q96ID5 467 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 HPDLQ96IR7 371 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 TGM7Q96PF1 710 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 LXNQ9BS40 222 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 NDUFAF3Q9BU61 184 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 TRMT61BQ9BVS5 477 aaKnown RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 RAB6CQ9H0N0 254 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 SLITRK6Q9H5Y7 841 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 RANBP3Q9H6Z4 567 aaPredicted RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 C10orf88Q9H8K7 445 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 KCNK12Q9HB15 430 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms