RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 IQCF5A8MTL0 148 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 CASKO14936 926 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 PLD2O14939 933 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 PRODHO43272 600 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 TNFSF14O43557 240 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 PRAF2O60831 178 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 ENTPD6O75354 484 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 STX11O75558 287 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 LRATO95237 230 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 POP4O95707 220 aaKnown RBP9.78□□□□□ -0.84
CHFR-219ENST00000541341 ACP2P11117 423 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 LAMP1P11279 417 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 CYP2A6P11509 494 aaPredicted RBP9.78□□□□□ -0.84
CHFR-219ENST00000541341 PSKH1P11801 424 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 ANXA3P12429 323 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 ATP1B2P14415 290 aaPredicted RBP9.78□□□□□ -0.84
CHFR-219ENST00000541341 MAGP20916 626 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 PRKACBP22694 351 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 TACR1P25103 407 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 CD27P26842 260 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 GRK5P34947 590 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 GRK6P43250 576 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 EVX1P49640 407 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 NUDT6P53370 316 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 METAP1P53582 386 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 CD83Q01151 205 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 HNRNPA0Q13151 305 aaKnown RBP9.78□□□□□ -0.84
CHFR-219ENST00000541341 PDE7AQ13946 482 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 ELAVL3Q14576 367 aaKnown RBP9.78□□□□□ -0.84
CHFR-219ENST00000541341 LAPTM4AQ15012 233 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 SEC23BQ15437 767 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 BAK1Q16611 211 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 POM121L1PQ3SYA9 428 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 PRAMEF8Q5VWM4 474 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 PRAMEF7Q5VXH5 474 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 ZNF776Q68DI1 518 aaPredicted RBP9.78□□□□□ -0.84
CHFR-219ENST00000541341 KIAA0895LQ68EN5 471 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 CDC73Q6P1J9 531 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 BHLHB9Q6PI77 547 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 ANGPTL8Q6UXH0 198 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 PAMR1Q6UXH9 720 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 QSOX2Q6ZRP7 698 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 RFPL4BQ6ZWI9 263 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 THOC6Q86W42 341 aaKnown RBP9.78□□□□□ -0.84
CHFR-219ENST00000541341 LRRC28Q86X40 367 aaPredicted RBP9.78□□□□□ -0.84
CHFR-219ENST00000541341 LAX1Q8IWV1 398 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 GPALPP1Q8IXQ4 340 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 PM20D2Q8IYS1 436 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 NAGSQ8N159 534 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 EID2Q8N6I1 236 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 Q8N9G6 341 aaPredicted RBP9.78□□□□□ -0.84
CHFR-219ENST00000541341 TMIEQ8NEW7 156 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 OR5H6Q8NGV6 325 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 LRRC20Q8TCA0 184 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 CXorf40AQ8TE69 158 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 SKA2Q8WVK7 121 aaPredicted RBP9.78□□□□□ -0.84
CHFR-219ENST00000541341 UBE2FQ969M7 185 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 FAM131CQ96AQ9 280 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 WDR34Q96EX3 536 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 SCRN2Q96FV2 425 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 PDXPQ96GD0 296 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 DMRTB1Q96MA1 342 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 CMTM3Q96MX0 182 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 ZNF578Q96N58 590 aaPredicted RBP9.78□□□□□ -0.84
CHFR-219ENST00000541341 OR5M11Q96RB7 305 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 KCNJ15Q99712 375 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 SOSTQ9BQB4 213 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 ORAI3Q9BRQ5 295 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 JAM3Q9BX67 310 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 TSSK6Q9BXA6 273 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 RSPH9Q9H1X1 276 aaPredicted RBP9.78□□□□□ -0.84
CHFR-219ENST00000541341 NMNAT1Q9HAN9 279 aaPredicted RBP9.78□□□□□ -0.84
CHFR-219ENST00000541341 SGK2Q9HBY8 427 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 MCUBQ9NWR8 336 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 NFKBIL1Q9UBC1 381 aaPredicted RBP9.78□□□□□ -0.84
CHFR-219ENST00000541341 CBLCQ9ULV8 474 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 NCKAP1Q9Y2A7 1128 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 DYRK1BQ9Y463 629 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 NUBP2Q9Y5Y2 271 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 APC2O95996 2303 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 A0A1W2PRQ8 180 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 TSPAN11A1L157 253 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 ANKDD1BA6NHY2 528 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 ZSCAN5BA6NJL1 495 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 H3BN98 237 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 PCDH7O60245 1069 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 MMP20O60882 483 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 PDGFAP04085 211 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 CTSLP07711 333 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 ARSBP15848 533 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 BPIP17213 487 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 EPORP19235 508 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 LHCGRP22888 699 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 F8A1P23610 371 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 RBMS1P29558 406 aaKnown RBP9.77□□□□□ -0.85
CHFR-219ENST00000541341 MAT2AP31153 395 aaKnown RBP9.77□□□□□ -0.85
CHFR-219ENST00000541341 GPC1P35052 558 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 TGFBR1P36897 503 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 KIR2DL3P43628 341 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 RECQLP46063 649 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms