RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 DNAAF1Q8NEP3 725 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 OR8J3Q8NGG0 315 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 OR51A7Q8NH64 312 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 WDR36Q8NI36 951 aaKnown RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 SPPL2AQ8TCT8 520 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 C2CD4CQ8TF44 421 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 SLC7A6Q92536 515 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 KCNJ9Q92806 393 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 APIPQ96GX9 242 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 SENP5Q96HI0 755 aaPredicted RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 RNF170Q96K19 258 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 STACQ99469 402 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 CMKLR1Q99788 373 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 TMEM121Q9BTD3 319 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 RAB1BQ9H0U4 201 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 RNF208Q9H0X6 261 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 SEMA6CQ9H3T2 930 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 FAM49BQ9NUQ9 324 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 FLRT1Q9NZU1 646 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 NXF1Q9UBU9 619 aaKnown RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 CHRNA9Q9UGM1 479 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 SLC6A5Q9Y345 797 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 PNMA8CA0A1B0GUJ8 204 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 FAM230AA0A1W2PPH8 454 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 TRDCB7Z8K6 153 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 C1QTNF3-AMACRE9PGA6 284 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 KCNK3O14649 394 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 RGS14O43566 566 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 SUSD5O60279 629 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 MSCO60682 206 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 GLRA3O75311 464 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 VPS26AO75436 327 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 VAPBO95292 243 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 TNFRSF6BO95407 300 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 RPLP1P05386 114 aaKnown RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 EPHX1P07099 455 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 ABHD2P08910 425 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 TACR2P21452 398 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 PRKCHP24723 683 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 HLA-DMAP28067 261 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 CD80P33681 288 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 DLSTP36957 453 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 SUOXP51687 545 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 NTRK2Q16620 822 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 MPEG1Q2M385 716 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 DNLZQ5SXM8 178 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 MRM1Q6IN84 353 aaKnown RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 TEX261Q6UWH6 196 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 VSTM1Q6UX27 236 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 WDR88Q6ZMY6 472 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 ZNF546Q86UE3 836 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 FAM71AQ8IYT1 594 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 TMEM102Q8N9M5 508 aaPredicted RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 NPRL2Q8WTW4 380 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 SAT2Q96F10 170 aaPredicted RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 LRR1Q96L50 414 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 FCRL2Q96LA5 508 aaPredicted RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 ZNF382Q96SR6 550 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 NIPSNAP1Q9BPW8 284 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 NAA11Q9BSU3 229 aaPredicted RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 SUCNR1Q9BXA5 334 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 GSX2Q9BZM3 304 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 NKX6-2Q9C056 277 aaPredicted RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 ZFYVE1Q9HBF4 777 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 KIF25Q9UIL4 384 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 U3KQ87 197 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 LRRC37A2A6NM11 1700 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 CENPFP49454 3210 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 A0A096LPI6 279 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 C20orf202A1L168 122 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 VSTM2BA6NLU5 285 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 H3BQ06 376 aaPredicted RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 SIAH2O43255 324 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 RAD51CO43502 376 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 PAPSS2O95340 614 aaPredicted RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 CBX7O95931 251 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 FTLP02792 175 aaPredicted RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 CSF1P09603 554 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 SPP1P10451 314 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 SPRP35270 261 aaPredicted RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 CEACAM6P40199 344 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 SNRPD2P62316 118 aaKnown RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 DMWDQ09019 674 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 PLA2G7Q13093 441 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 HAGHQ16775 308 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 TATDN3Q17R31 274 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 MICBQ29980 383 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 CLEC16AQ2KHT3 1053 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 OR8G2PQ6IF36 304 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 MAMDC4Q6UXC1 1216 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 CD300LGQ6UXG3 332 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 ADAT2Q7Z6V5 191 aaKnown RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 LDB1Q86U70 411 aaPredicted RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 LYSMD2Q8IV50 215 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 PQLC1Q8N2U9 271 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 OR13F1Q8NGS4 319 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 RNASE8Q8TDE3 154 aaKnown RBP5.84□□□□□ -1.47
LMO3-225ENST00000541295 SPSB1Q96BD6 273 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 NXNL1Q96CM4 212 aa5.84□□□□□ -1.47
LMO3-225ENST00000541295 PPP1R16AQ96I34 528 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms